Gene Caci_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0659 
Symbol 
ID8331989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp764348 
End bp765313 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID644953812 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003111436 
Protein GI256389872 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG CCGCCGAAGA AGGACAACGC GGGCCCACGG TGCCGGACGG CGCGGCCGAT 
GCCCCCGAAC GGCCCGCCGC GCAGCAGATG ACGACCACGG CGTGGGTCGC CCTCGGCGCG
GTCTACTTCG TCTGGGGCTC CACCTACCTC GCGATCCGCT ACGCCATCGA GTCCATCCCG
CCGCTGTCGT CCGCGGCGCT GCGGTTCACC CTCGCCGGCT TGGTGCTCCT CACCTTCCTC
GCGATTCGTC GCGGGCCCTC GGCGCTGCGC GTCACGCGAG GCCAGCTCGC CTCGGCCGCA
CTGATCGGCA CGCTGCTGCT GCTCGGCGGG AACGGCTTCG TGGTCTTGTC CGAGCAGTAC
ATCCCGTCTG GGACGTCCGC GCTCCTGGTC GCGTCCGTGC CGTTGTGGAT CGTGGTTTGG
CGTGCGGTGG CGAAGGATCG GCCGACCGTG AAGACGCTGG TCGGCGTGCT CATCGGCTTC
GCCGGACTCG TGGTGCTGAT GCGGCCCGGT GGCGGCGGTG CGCACAACTA CGTGCTGGGC
GTTGTGCTCG TGCTGATCGC CTCTGTCAGT TGGGCGTTCG GGTCGGTGGC GTCCAAGGCG
TGGCTGACGC CGCCGAAGGA CGTGTTCGTG GCGTCGGCGT ACCAGATGGT GTTCGGCGGC
ATCGGCTGCG CGATCGCGGC GGCGCTGCAC GGCGAGCACT TCGACCCCGG CGCGATCACC
GGCACGTCGG TGTGGGCGAC GCTTTATCTC GTCGGCGCGG GATCACTTGT GGCGTTCTCG
TCCTATGTGT GGCTGTTGAA GAACGCGCCG ATTTCCACTG TCGCAACATA CGCATATGTG
AACCCTGTTG TAGCCGTCGC ACTCGGGGCC CTCTTCCTGA GCGAGACCAT CACCACAGCG
GTGGTTGTCG GAGGCTTGAT CGTGGTGCTC GGAGTGGCCG TCGTGATAGC GACGGAGCGC
AGGTGA
 
Protein sequence
MTIAAEEGQR GPTVPDGAAD APERPAAQQM TTTAWVALGA VYFVWGSTYL AIRYAIESIP 
PLSSAALRFT LAGLVLLTFL AIRRGPSALR VTRGQLASAA LIGTLLLLGG NGFVVLSEQY
IPSGTSALLV ASVPLWIVVW RAVAKDRPTV KTLVGVLIGF AGLVVLMRPG GGGAHNYVLG
VVLVLIASVS WAFGSVASKA WLTPPKDVFV ASAYQMVFGG IGCAIAAALH GEHFDPGAIT
GTSVWATLYL VGAGSLVAFS SYVWLLKNAP ISTVATYAYV NPVVAVALGA LFLSETITTA
VVVGGLIVVL GVAVVIATER R