| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0646 |
|---|
| Symbol | |
|---|
| ID | 8331976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 751979 |
|---|
| End bp | 752905 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644953799 |
|---|
| Product | Proline dehydrogenase |
|---|
| Protein accession | YP_003111423 |
|---|
| Protein GI | 256389859 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0506] Proline dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.807142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGCC AAACGCTTCT CGCCGCCTCC CGCAGCGCCA AGATGCGCGG GATGATCACC
GGTGTCCCCT TGACCCGCCG CGTCGTCGAC CGGTTCGTCG CGGGGGACAA CCTGGACCAG
GCCAGCCTGA TCATCAGCGA CCTGGTGGAC CAGGGTCTGG CGGTCACCGT GGACCGGCTC
GGCGAGGACA CCCAGGACGC CGCTGACGCC GCCGCCACCC GCGACGCCTA CCTGGAGATG
CTCAAGCGTT TCGCCGACCT CGGCATCGCG CACCGCACCG AGGTCTCGCT CAAGCTCTCC
GCCCTCGGCC AGAAGCTTCC CCAGGACGCC GAGAAGATCG CGTTGGAGAA CGCCATCGCG
ATCGCCGAGG CGGCGCGCGA CGCCGGGACC ACCATGACCC TGGACATGGA GGACCACACC
ACGGTCGACG CCACCCTCGG CGCCCTGCGC GAGCTGCGCG GCGAGTTCCC GTGGGTCGGC
GTGGCGATCC AGGCCGCGCT GTTCCGCACC GAGGGCGACG TCGCCGACCT GGCCACCGCC
GGCTCTCGGG TGCGGCTGGT GAAGGGCGCG TATATGGAGC CCGCCTCCGT CGCGCACCAG
GAGAAGCACG AGGTGGACAA GGCGTACGTG CGCGCCATGA AGACCCTGAT GCGCTCCTCG
GCGTACCCGA TGATCGCCAG CCACGACCAG CGCATGATCG ACATCGCGCA CGCGCTGATC
GCCGAGACCG GCCGCGCGCA CGACGCGCAG GAGTTCCAGA TGCTGCACGG CATCCGGACC
ACCGAACAGC ACAGGCTGGT CGACGGCGGC GACACGATGC GCGTGTACGT GCCCTTCGGC
GACGACTGGT ACGGCTACTT CATGCGCCGG CTGGCCGAGC GCCCGGCCAA CGTCATGTTC
TTCCTGAACT CGCTCGTCAA GCGCTAA
|
|---|
| Protein sequence | MLSQTLLAAS RSAKMRGMIT GVPLTRRVVD RFVAGDNLDQ ASLIISDLVD QGLAVTVDRL
GEDTQDAADA AATRDAYLEM LKRFADLGIA HRTEVSLKLS ALGQKLPQDA EKIALENAIA
IAEAARDAGT TMTLDMEDHT TVDATLGALR ELRGEFPWVG VAIQAALFRT EGDVADLATA
GSRVRLVKGA YMEPASVAHQ EKHEVDKAYV RAMKTLMRSS AYPMIASHDQ RMIDIAHALI
AETGRAHDAQ EFQMLHGIRT TEQHRLVDGG DTMRVYVPFG DDWYGYFMRR LAERPANVMF
FLNSLVKR
|
|---|
| |