| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0635 |
|---|
| Symbol | |
|---|
| ID | 8331964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 740810 |
|---|
| End bp | 742102 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953787 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003111412 |
|---|
| Protein GI | 256389848 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.181904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA CCAACAAGCG ACTGAGCGCC GTCCTGGAGG GCGGGTTCTG GTTCTTCGTG
ATGCTGTTCC CGATGCTGCT GGGCACCATC GCCCTGACGC TGGTGGCCGG CATGGCCGGT
ATCGGGCTCG GCCTGCTCCT GCTCCCGCCG GCCGCGGTCT ACCTGCGCTG GCTGGCCGAC
CTGCGGCGCA CGAAGGTGCG GGCCTGGCGG GGCATCGAGA TCCCGCGGCC CTACCGCGCC
GCGCCGGAGT TCGGTCCCGG GTTCGGCGGC TACTTCGAGA GGATCAAGTT CCACGGCACC
GACCCGGCGT TCTGGCGGGA CGGCGCGTGG GTGCTCGTCG ACCCGGTCGT CGGCGCGTTC
CTGGCGCTCC TCCCCCTCGC CTTGGTGATG GAGGGCCTGT ACGGCTTCGT GATCAGTGCC
CTGTGGAGCC TGTTCGTCGA CCACGGCTTC AACGACTGGT TCGGCTTCAT CCACGTCCAC
AAGGGCAACG AGGGCATGCG CTGGGCGCCG TCGGCCCTCG GCGTCCTGGA GATCGCCCTG
GGCTTCGCCA TCGCGCCGAA GATGCTGGAG TTGCACGCCC GCTGGTCCCG CGTCCTGCTG
GCGCCGACGC CGGCCCAGGT CGAGGCCCGG ATGAAGCACC TGACCCAGAC CCGTGCCGAC
GCCGTGGACA CCCAGGCCGC CGAGCTGCGC CGGATCGAGC GCGATCTGCA CGACGGCGCG
CAGGCGCGGC TGGTCGCCAT GGGCATGCAC CTCAACGCGG CCTCACAATT GATGGAGCGC
GACCCCGAGG CGGCGCAGAA GCTCCTGTCG GAAGCCCGCG ATTCCTCGGC CAAGGCGCTG
TCCGAGCTGC GTGACCTGGT GCGCGGCATC CACCCGCCGG TGCTGGCCGA CCGCGGTCTG
GTCGACGCGG TGCGCGCCAC GGCGCTGGAC TCGCCGCTGG ACGTCGAGGT CCACGCCGAG
GTCCCCGGAC GGCTGGACGC GCCGCTGGAG TCGGCGGCGT ACTTCGCGGT CAGCGAGGCC
CTGACCAACG TCGCCAAGCA CGCCCACGCC GGGCACGTCT GGATCGACAT GCGGGTCCAC
AACGGCTTGC TGAAGATCAC GGTCAGCGAC GACGGAATCG GCGGCGCGGA TCTGGACAAG
GGCAGCGGAC TGCGCGGGAT CGAGCGCCGG CTTGCTACCT TCGACGGGAT CCTCGCCCTG
AGCAGCCCGC AGGGCGGACC GACTGTCGTG ACCATGGAGC TGCCGTGCGT GTCGTCCTCG
CCGAAGACCT CTTCCTCCTC CGGGACGGCA TGA
|
|---|
| Protein sequence | MTNTNKRLSA VLEGGFWFFV MLFPMLLGTI ALTLVAGMAG IGLGLLLLPP AAVYLRWLAD
LRRTKVRAWR GIEIPRPYRA APEFGPGFGG YFERIKFHGT DPAFWRDGAW VLVDPVVGAF
LALLPLALVM EGLYGFVISA LWSLFVDHGF NDWFGFIHVH KGNEGMRWAP SALGVLEIAL
GFAIAPKMLE LHARWSRVLL APTPAQVEAR MKHLTQTRAD AVDTQAAELR RIERDLHDGA
QARLVAMGMH LNAASQLMER DPEAAQKLLS EARDSSAKAL SELRDLVRGI HPPVLADRGL
VDAVRATALD SPLDVEVHAE VPGRLDAPLE SAAYFAVSEA LTNVAKHAHA GHVWIDMRVH
NGLLKITVSD DGIGGADLDK GSGLRGIERR LATFDGILAL SSPQGGPTVV TMELPCVSSS
PKTSSSSGTA
|
|---|
| |