Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0630 |
Symbol | |
ID | 8331959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 735068 |
End bp | 735481 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644953782 |
Product | PilT protein domain protein |
Protein accession | YP_003111407 |
Protein GI | 256389843 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.317071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCA TCGACACGAA CGTCTTCTCC GAACTCATGC GGCCGGCGCC CGACGCGGCG GTGGCGGCTT GGGTCGAGGA ATTCGGCCGC GACCTGTTCC TCACGGCGGT GAGCGTGGCT GAGCTCCGGC ACGGCATCCT TCGGATGTCC GGGGGTCGGC GCAGGTCCGA CCTCATGACG GACACGGATG CGTTACTCGC CGAATTCGAC CAACGAGTAC TGCCCTTCGA CGTGGCGGCG GCAGAGTACT ACGCGATGGT GGTGGCGAGT CGCTTCGCAG GCGGCCGCCC CATTTCCTTC CCCGACGCGC AGATCGCAGC GATCTGTCAA GCCCACGGTG CTTTGCTGGC GACCCGCAAC GTCAAAGACT TCGAATACCT CGGCCTCACC GTCATCGATC CCTGGACCCG CTGA
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Protein sequence | MIIIDTNVFS ELMRPAPDAA VAAWVEEFGR DLFLTAVSVA ELRHGILRMS GGRRRSDLMT DTDALLAEFD QRVLPFDVAA AEYYAMVVAS RFAGGRPISF PDAQIAAICQ AHGALLATRN VKDFEYLGLT VIDPWTR
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