Gene Caci_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0619 
Symbol 
ID8331948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp722708 
End bp723430 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID644953771 
Productbeta-lactamase domain protein 
Protein accessionYP_003111396 
Protein GI256389832 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.256454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC AGCCGGCGTA CCAACTGACC CCCCAAGTGT GGCGAATTCC AGCCGGACCC 
TTTGATTTCG TCAACAGCTT CGCCATCGTC GAAGACGACG GCCGGGTGTC GTTGGTCGAC
ACCGGCATGC CGAGTTCGGC CGGCCGCATC GAGGCGGGTC TGAAGGCGAT GGGGAAGAGC
GTGCAGGACG TGCACCGCAT CGTCCTCACC CACGCGCACG GCGACCACGC CGGCGGCGCC
GCCAAGCTGA AGGAGGCGAC CGACGCCGAC ATCTCGATCA GCGCGATCGA CGCGCCTTTC
GCGCGCGGCG GCTACGCCCC GCCCCGCGAC GGCTCCACGC TCGGCGGCAA GTTCCTGAAC
CTGTTGGGTC CCAAGGGAAA CAAGTTCGCG AAGGTGATCG TCGGCGAGGA GTTCGCCGAC
GGCGACGTGC TGCCGGTCGG CGGCGGTCTG CGCGTCGTGC ACACCCCCGG CCACACCCCC
GGGCACGTGG CGCTGCGGCA CGAGGCCGAC GGCGTGCTGA TCACCGGCGA CTCGATCTGG
AACGTCCGGA AGATGGGGTG GGGCGTCCGC GCCTTCTGCT CCGACATCAA GCTCAACCAG
AAGACCGCGG ACGTGCTCGG CGAGCTGGAC TACGAGATCG CCGCGTTCAC CCACGGCAAG
CATGTGACCC AGAACGCCCG CGAGACCGTG CGGCGGTTTC TGAAGGAGGC CAAGCGCGCA
TGA
 
Protein sequence
MASQPAYQLT PQVWRIPAGP FDFVNSFAIV EDDGRVSLVD TGMPSSAGRI EAGLKAMGKS 
VQDVHRIVLT HAHGDHAGGA AKLKEATDAD ISISAIDAPF ARGGYAPPRD GSTLGGKFLN
LLGPKGNKFA KVIVGEEFAD GDVLPVGGGL RVVHTPGHTP GHVALRHEAD GVLITGDSIW
NVRKMGWGVR AFCSDIKLNQ KTADVLGELD YEIAAFTHGK HVTQNARETV RRFLKEAKRA