Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0619 |
Symbol | |
ID | 8331948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 722708 |
End bp | 723430 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953771 |
Product | beta-lactamase domain protein |
Protein accession | YP_003111396 |
Protein GI | 256389832 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.256454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCC AGCCGGCGTA CCAACTGACC CCCCAAGTGT GGCGAATTCC AGCCGGACCC TTTGATTTCG TCAACAGCTT CGCCATCGTC GAAGACGACG GCCGGGTGTC GTTGGTCGAC ACCGGCATGC CGAGTTCGGC CGGCCGCATC GAGGCGGGTC TGAAGGCGAT GGGGAAGAGC GTGCAGGACG TGCACCGCAT CGTCCTCACC CACGCGCACG GCGACCACGC CGGCGGCGCC GCCAAGCTGA AGGAGGCGAC CGACGCCGAC ATCTCGATCA GCGCGATCGA CGCGCCTTTC GCGCGCGGCG GCTACGCCCC GCCCCGCGAC GGCTCCACGC TCGGCGGCAA GTTCCTGAAC CTGTTGGGTC CCAAGGGAAA CAAGTTCGCG AAGGTGATCG TCGGCGAGGA GTTCGCCGAC GGCGACGTGC TGCCGGTCGG CGGCGGTCTG CGCGTCGTGC ACACCCCCGG CCACACCCCC GGGCACGTGG CGCTGCGGCA CGAGGCCGAC GGCGTGCTGA TCACCGGCGA CTCGATCTGG AACGTCCGGA AGATGGGGTG GGGCGTCCGC GCCTTCTGCT CCGACATCAA GCTCAACCAG AAGACCGCGG ACGTGCTCGG CGAGCTGGAC TACGAGATCG CCGCGTTCAC CCACGGCAAG CATGTGACCC AGAACGCCCG CGAGACCGTG CGGCGGTTTC TGAAGGAGGC CAAGCGCGCA TGA
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Protein sequence | MASQPAYQLT PQVWRIPAGP FDFVNSFAIV EDDGRVSLVD TGMPSSAGRI EAGLKAMGKS VQDVHRIVLT HAHGDHAGGA AKLKEATDAD ISISAIDAPF ARGGYAPPRD GSTLGGKFLN LLGPKGNKFA KVIVGEEFAD GDVLPVGGGL RVVHTPGHTP GHVALRHEAD GVLITGDSIW NVRKMGWGVR AFCSDIKLNQ KTADVLGELD YEIAAFTHGK HVTQNARETV RRFLKEAKRA
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