Gene Caci_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0609 
Symbol 
ID8331938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp710696 
End bp712024 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content73% 
IMG OID644953761 
Producthistidine kinase 
Protein accessionYP_003111386 
Protein GI256389822 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.54142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGG ACATGCCCAC CACGCTGCCG CAGTCCTTCG AGGACGCCGC TGAGTCCGAA 
GGGCCGCGGA TCGGGTTCGT CGCGGCGGCG CTGTATCTCG TTGCCAGCTC GGTGTTGTGG
GCGGTCGCGT TCGCGGGGGT CGGGGCGCTG CTGCTGCTCG GCGTGGTGAT GTCGGTGACG
CCGCTCGGGC CCTGGGTGCT GGCGGTGGCG GTGGCGGCGG CGCGGGGGTT CGGGGTGCTG
TACCGGGGGT TGGTGCTGCG GCTGTTCGGG GAGCGGTTGG AGCCGCCCGC CGAGCGGACC
GAGCGGGGGG CGCTGGCGTG GCGGCGTTTC ATGCTCAGCG CGGACGGCGG CGGGTGGATG
GAGGTCGCGT TCCTGTCCAT GCGCGTGCCG GTCGCGCTGC TGAACCTGAT CGTCGGCGTC
GGGCTGTGGG TGTACGGGCT GCTGTGGGTG TTCTGGCCGC TGCTGCGGAA CTGGGACGAC
CTGTATTCGC GCCAGCCGGA CGGCACGGTC CGGCGCGGCA TGCACATCTT CGGGTTCTGG
TTCGACACGC TCCAGCGCTC GTTCCTGCTC ACGGTCGTCG GGCTGCTGAC CGTCGCGCTG
GCGGCGTGGG TGGCGCGCAA GCTGGTGGCG CTGGACATGC GGTTCTATCG GGGGGCGCTC
GGTTCGGGCC GGATGGAGGC GCGGGTGCGG GAGCTGGAGC GGACGCGCAG CTACGCGGTC
GACGACTCGG CGGCGACGCT GCGCCGCATC GAGCGCGACC TGCACGACGG CGCGCAGGCC
CGGCTGGTCG CGCTGGGGAT GCAGCTGGTG ATGCTGAAGG ACAGCCTCGG TGGCGAGCAG
GCGGACGACC CGCGCCTGGA GAGCAGCCGC GGATTGATCG ACCAGGCGCA GGTGACGGCG
AAGACGGCGA TCGCCGAACT GCGCGACCTG GTCCGCGGCA TCCACCCACC GACACTGGAT
CAGGGGTTGG AGACGGCGCT GCGGACGCTG ACCGCGCACG GGTCCGTCCC GACCGAGCTG
ACGGTGCGGG TCCCGGACCC GCGTCCGGCA GCGGCGATCG AGACGATGGC CTACTTCTGT
GCCGCCGAGC TGCTGACGAA TGTCGCCAAG CACGGACAGG CGACGCGCGC GCTCGTGACG
GTCCAGGCTG ACGGTCGCCA CCTCGTGCTG ACGGTCGCCG ACGACGGTCG CGGCGGGGCG
CGGATCCAGC CGGGCGGCGG GCTGGCGGGG CTGGCGGACC GGGTCGGGAC GGTGGACGGG
TCGATCGAGG TCGACAGTCC CGAGGGCGGG CCGACGGTGG TGACGGTCGC GCTGCCGATG
CGGGCTTGA
 
Protein sequence
MMVDMPTTLP QSFEDAAESE GPRIGFVAAA LYLVASSVLW AVAFAGVGAL LLLGVVMSVT 
PLGPWVLAVA VAAARGFGVL YRGLVLRLFG ERLEPPAERT ERGALAWRRF MLSADGGGWM
EVAFLSMRVP VALLNLIVGV GLWVYGLLWV FWPLLRNWDD LYSRQPDGTV RRGMHIFGFW
FDTLQRSFLL TVVGLLTVAL AAWVARKLVA LDMRFYRGAL GSGRMEARVR ELERTRSYAV
DDSAATLRRI ERDLHDGAQA RLVALGMQLV MLKDSLGGEQ ADDPRLESSR GLIDQAQVTA
KTAIAELRDL VRGIHPPTLD QGLETALRTL TAHGSVPTEL TVRVPDPRPA AAIETMAYFC
AAELLTNVAK HGQATRALVT VQADGRHLVL TVADDGRGGA RIQPGGGLAG LADRVGTVDG
SIEVDSPEGG PTVVTVALPM RA