Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0609 |
Symbol | |
ID | 8331938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 710696 |
End bp | 712024 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953761 |
Product | histidine kinase |
Protein accession | YP_003111386 |
Protein GI | 256389822 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.54142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGTGG ACATGCCCAC CACGCTGCCG CAGTCCTTCG AGGACGCCGC TGAGTCCGAA GGGCCGCGGA TCGGGTTCGT CGCGGCGGCG CTGTATCTCG TTGCCAGCTC GGTGTTGTGG GCGGTCGCGT TCGCGGGGGT CGGGGCGCTG CTGCTGCTCG GCGTGGTGAT GTCGGTGACG CCGCTCGGGC CCTGGGTGCT GGCGGTGGCG GTGGCGGCGG CGCGGGGGTT CGGGGTGCTG TACCGGGGGT TGGTGCTGCG GCTGTTCGGG GAGCGGTTGG AGCCGCCCGC CGAGCGGACC GAGCGGGGGG CGCTGGCGTG GCGGCGTTTC ATGCTCAGCG CGGACGGCGG CGGGTGGATG GAGGTCGCGT TCCTGTCCAT GCGCGTGCCG GTCGCGCTGC TGAACCTGAT CGTCGGCGTC GGGCTGTGGG TGTACGGGCT GCTGTGGGTG TTCTGGCCGC TGCTGCGGAA CTGGGACGAC CTGTATTCGC GCCAGCCGGA CGGCACGGTC CGGCGCGGCA TGCACATCTT CGGGTTCTGG TTCGACACGC TCCAGCGCTC GTTCCTGCTC ACGGTCGTCG GGCTGCTGAC CGTCGCGCTG GCGGCGTGGG TGGCGCGCAA GCTGGTGGCG CTGGACATGC GGTTCTATCG GGGGGCGCTC GGTTCGGGCC GGATGGAGGC GCGGGTGCGG GAGCTGGAGC GGACGCGCAG CTACGCGGTC GACGACTCGG CGGCGACGCT GCGCCGCATC GAGCGCGACC TGCACGACGG CGCGCAGGCC CGGCTGGTCG CGCTGGGGAT GCAGCTGGTG ATGCTGAAGG ACAGCCTCGG TGGCGAGCAG GCGGACGACC CGCGCCTGGA GAGCAGCCGC GGATTGATCG ACCAGGCGCA GGTGACGGCG AAGACGGCGA TCGCCGAACT GCGCGACCTG GTCCGCGGCA TCCACCCACC GACACTGGAT CAGGGGTTGG AGACGGCGCT GCGGACGCTG ACCGCGCACG GGTCCGTCCC GACCGAGCTG ACGGTGCGGG TCCCGGACCC GCGTCCGGCA GCGGCGATCG AGACGATGGC CTACTTCTGT GCCGCCGAGC TGCTGACGAA TGTCGCCAAG CACGGACAGG CGACGCGCGC GCTCGTGACG GTCCAGGCTG ACGGTCGCCA CCTCGTGCTG ACGGTCGCCG ACGACGGTCG CGGCGGGGCG CGGATCCAGC CGGGCGGCGG GCTGGCGGGG CTGGCGGACC GGGTCGGGAC GGTGGACGGG TCGATCGAGG TCGACAGTCC CGAGGGCGGG CCGACGGTGG TGACGGTCGC GCTGCCGATG CGGGCTTGA
|
Protein sequence | MMVDMPTTLP QSFEDAAESE GPRIGFVAAA LYLVASSVLW AVAFAGVGAL LLLGVVMSVT PLGPWVLAVA VAAARGFGVL YRGLVLRLFG ERLEPPAERT ERGALAWRRF MLSADGGGWM EVAFLSMRVP VALLNLIVGV GLWVYGLLWV FWPLLRNWDD LYSRQPDGTV RRGMHIFGFW FDTLQRSFLL TVVGLLTVAL AAWVARKLVA LDMRFYRGAL GSGRMEARVR ELERTRSYAV DDSAATLRRI ERDLHDGAQA RLVALGMQLV MLKDSLGGEQ ADDPRLESSR GLIDQAQVTA KTAIAELRDL VRGIHPPTLD QGLETALRTL TAHGSVPTEL TVRVPDPRPA AAIETMAYFC AAELLTNVAK HGQATRALVT VQADGRHLVL TVADDGRGGA RIQPGGGLAG LADRVGTVDG SIEVDSPEGG PTVVTVALPM RA
|
| |