Gene Caci_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0451 
Symbol 
ID8331778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp508308 
End bp509465 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID644953617 
Productprotein of unknown function DUF916 cell surface putative 
Protein accessionYP_003111244 
Protein GI256389680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.824253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC TCCGTTCCCT GATCAAGGTG CTGGCTGCCA CGGCCGTGGC CGGTGTGCTC 
CTGACGAGCC CGGCGTCGGC CGGGACCCCG CCGAGGACCG ATCCGGCGCC CGCGCCCGCG
CCGACCGCCG GCGCGGCGAC CTTCGGCATC CAGCCGGCCA CCGCCACCGC GCGCGACAAG
ACCCGCGACT CCTTCACCTA CCAGGCGACG CCGGGCGCGA AGAAGACCGA CTACGTCGCG
GTCTCCAACT ACAGCACCAG CCCGCTGACC CTGCGCATCT ACGCGACCGA CGCCTATAAC
ACCGCGGACG GCGGCTTCAC GGTCCTGCCA CTGGCGACCA AGCCGCGCGA CGTCGGCCTG
TGGGTGTCCT TCCCCACCAC CGGCGTCACC CTGGCCGCCA AGTCCTCGAA GATCCTGCCC
TTCACGCTGA CCGTCCCCGC CGACGCCAAG CCCGGCGACC ACGTCGGCGG CATCATGCTG
TCGCTGACGA CGCAGGCCGC GGACGCCAAG GGCGGCCAGA TCGCGGTCGA GTCCCGCGTC
GGGACGCGGC TGCAGGTGCG CGTCCCCGGA ACGCTGAAGG CACAGCTGAC CGTGAGCCAC
ATATCAACGT CCTACCACGC CTCCTCGAAC CCGTTCGGCG GCGGCACGAT GACCGTGTCC
TACACCGTCG CGAACACCGG GAACGTCCGG CTGTCGGGAA CACAGAAGGT GCACGTCACC
AGCCTGTTCG GCGGCTCCAA GCCCAGCCTG CCCCTCGCCA ACGTCAAGGA ACTGCTGCCC
GGCGACCAGG AGCGGGTGAC GGCGACGGTG AAGTCGGTGC TGCCGTCCTT CAGCTCCACG
GCGCACATCT CGGTCGTGCC GACACCGGTC GTCGGGGACA TCGATCCGGT GCTGGCAGCC
GTGGACGAGA GCGCGTCGGT GGCGACGATC CCGTGGCCCA TGATCCTGCT GCTCCTGGCG
CTCGGCGCTT TCGGCGGCGT GTGGGTGTGG CGGCGGCGGG TGCGGGTGCG GGTGCGTAAG
CAGCAGGCCG CGAAGGCGAA AGCGAAAGCC GCGAAGACTG CTCCGGCGAA GAAGACCGCG
GTGCCTGCCA CTGCCGCCGC CACTGCCACT GCCGGCGCCG CGTCGAAGGC GGAAAGCGGA
AAGGCAGAGG ACGTATGA
 
Protein sequence
MPRLRSLIKV LAATAVAGVL LTSPASAGTP PRTDPAPAPA PTAGAATFGI QPATATARDK 
TRDSFTYQAT PGAKKTDYVA VSNYSTSPLT LRIYATDAYN TADGGFTVLP LATKPRDVGL
WVSFPTTGVT LAAKSSKILP FTLTVPADAK PGDHVGGIML SLTTQAADAK GGQIAVESRV
GTRLQVRVPG TLKAQLTVSH ISTSYHASSN PFGGGTMTVS YTVANTGNVR LSGTQKVHVT
SLFGGSKPSL PLANVKELLP GDQERVTATV KSVLPSFSST AHISVVPTPV VGDIDPVLAA
VDESASVATI PWPMILLLLA LGAFGGVWVW RRRVRVRVRK QQAAKAKAKA AKTAPAKKTA
VPATAAATAT AGAASKAESG KAEDV