Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0408 |
Symbol | |
ID | 8331735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 454259 |
End bp | 455722 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953574 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003111201 |
Protein GI | 256389637 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.417643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGA CAGATTCGCT CGCTCGTGAT GCCGAGCGGG TCGGTTCTGG GGCTGAGGCT CGCTTTGACT CTGACGCTCG CTCGGGATCT GGCTCTGGAT CTAGCTCTGG CTCTGCGCGC TCCGTCGGGT CGCCGAAGCT CACGCTCTTC GCCGCGCTGC TCGGTTTCGT GATGATCGCG CTGGATGCTT CGGCGGTGAA CGTCGCGCTG CCGGCGGTCG GTCGCGGGCT CGGCGGGTCC ACGGCGGGGT TGCAGTGGAT CGTTGATGCC TACACGCTGA TGTTCGCCGC GCTGCTGCTG TCTGCCGGTG CGTTCTCGGA CCGGCTCGGC GCGAGTCGCT TGTATGGGGG TGGAGCCGCC GCGTTCACGC TGGCTTCCGT GGCGTGCGGA TTGGCGCCGT CGCTCGGCTT CCTGATCGGG GCGCGGTTGG TGCAGGGCAG TGCGGCGGCG TTGATGCTGC CGTCGTCGTT GGCGTTGGTG CGGCAGGCGT TTCCGGACGC GTCGGCACGA GCGGCGGCGA TCGCGCAGTG GACGATGGCC GGTGCGGCGT CCACGGCGGT CGGTCCGGTG CTCGGCGGTG CGCTCACCAG CTCGGTGAGC TGGCGGTCGA TCTTCTTCCT GAACCTTCCG GTGGGCTTGG TCATCCTGGG CGCGCTGCGG CGTACCGAGC GCTCGGTGCG GCGTCCGGCA CCGCTGGACC TGCCGGGTCA GCTCACTGCG ATCGTCGGTC TGGCGGCCCT GACTTATGGC GTGATCTCCG GAGGCGCTTC GGGCTTCGGA CGTCCGCAGG CGTGGGCGAG CGTGCTGCTG GCGCTGGTGT CGTTCGGCGC GTTCGGCGTG GTCGAGCACC GCGCGACGGA GCCGATGCTG CCGCTGGGAC TGCTGCGCGA CCGGGTCGTG GCGGTGTGCC TGGCGGTCGG CTTCGTGGTC AACGCGGCGT ACTATGGACT GATCTTCGTC TTCGGCCTGT TCGCCCAGGA CATCCTGGGA CGCTCGGCAG TCGGCGCCGG CCTGGTGTTC ATGCCGACCG CCATCCTGTG CACGATCACG AACCTGTTCT CCGCCCGCGC CGCCGCACGC TGGGGCGCGC GCACACCGGT GCTCGTGGGA CAGCTCGCCT GCGCTGCGGG ACTGCTGGTC CTACTGCTGG TGAACACCCA CACGAGCGCC CTGGAGTTGG CACTGTTGCT GCTGCCACTG GCCGGCGGAC TCGGCTTCGC AGTGCCCTCA CTCACCGCGA TGATGCTCAG CGGCATCGCA CCGGAGCGAG CCGGCCTGGC GGGAGGAGTG CTCAACTCCT TCCGGCAGAC CGGCGGCGCA CTCGCGGTGG CAGGGTTCGG TGCGCTGGTC GCGCAGCACG GCGGGTTCGT GACCGGACTA CATGTCAGCC TACTGATCTC GGTGGCACTG CTGGCGGTGA CGACGCTGGG CACGCTGGCG CTGCCGAAGG TGGGGCGACG GTGA
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Protein sequence | MPQTDSLARD AERVGSGAEA RFDSDARSGS GSGSSSGSAR SVGSPKLTLF AALLGFVMIA LDASAVNVAL PAVGRGLGGS TAGLQWIVDA YTLMFAALLL SAGAFSDRLG ASRLYGGGAA AFTLASVACG LAPSLGFLIG ARLVQGSAAA LMLPSSLALV RQAFPDASAR AAAIAQWTMA GAASTAVGPV LGGALTSSVS WRSIFFLNLP VGLVILGALR RTERSVRRPA PLDLPGQLTA IVGLAALTYG VISGGASGFG RPQAWASVLL ALVSFGAFGV VEHRATEPML PLGLLRDRVV AVCLAVGFVV NAAYYGLIFV FGLFAQDILG RSAVGAGLVF MPTAILCTIT NLFSARAAAR WGARTPVLVG QLACAAGLLV LLLVNTHTSA LELALLLLPL AGGLGFAVPS LTAMMLSGIA PERAGLAGGV LNSFRQTGGA LAVAGFGALV AQHGGFVTGL HVSLLISVAL LAVTTLGTLA LPKVGRR
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