| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0353 |
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| Symbol | |
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| ID | 8331680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 397134 |
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| End bp | 398669 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644953520 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003111147 |
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| Protein GI | 256389583 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.252559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGT GGCTACCGCT CGTCGCGGTC TGCTTGGGGA CGTTCATGCT GTTGGTGGAC
GTCACCATCG TCACCGTCGC CCTGCCCGAC ATGGCCCGGA GCCTGGACAC CACGTTCGCC
GACCTCCAGT GGGTCATGGA CGTCTACGCC CTGGTGCTCG CCGCGCTGCT GCTGGCCGCC
GGCTCGCTCG GCGACCGCGC CGGGCACCGC CGGCTCTACG TCGCCGGGCT CGTCGTCTTC
GCCGCCGCCT CGCTGGCCTG CGGCCTGGCC ACGAGTCCCG GCGTGCTGAT CGCGTTCCGC
GCCGTGCAGG GCGTCGGGGG CGCGGCGATG CTGGCCACCA CGGTCGCCCT GATCAGCCAT
CTGTATTCCG GGCGCGACCT GGGCACCGCC TTCGGGGTCT GGGGCGCGGT CAGCGGCGCG
GCCGCGGCGG CCGGGCCGAT CATGGGCGGG CTGCTCACCC AGCACCTGGA CTGGCGCTGG
ATCTTCTTCG TCAACCTGCC GATCAGCGTG GCGGCGGTGG CGATGACGCT GCGGTACGTC
GGGGAGTCGC GCGGGGAGCG GCGCCGCGGA CTGGACCTGC CGGGCCTGCT GACGTTCACC
GCGGCGGCGG GACTGGCGAC GTACGCGCTG ATCAAGGGCA ACGACTACGG CTGGGGCTCC
GCACGCACGA TCGGGGTCTT CGCCGGGGCG GCGGTGGCGC TGGTCGCGTT CGTCGTGGCG
GAGCTGCGGG TGCGGACGCC GCTGCTGGAC CTGAGCTTGT TCCGGCGCGG GACATTCACC
GGTGTGATGA TCGGTGCGCT GCTGCTGTCG GGGGCGGCGT TCTCCTACTT CGCGTACGAG
TCCCTGTGGT TGCAGTCGGC GCTGGGCATG AGCCCGGTGA CGGCCGGGCT GTGCTTCGTG
CCGATGAGCG GGGCGGCGTT CGTCACCGCC GGACTCGGCG GGCGGCTGCT GGAGGACCGG
CTCTCGCCGC GGGTGATGAT CGGCGGCGGT CTGCTGCTGA TCGCGGCCGG TTCGGCGGCG
CAGATGCTGG TCAGCGCCGG GTCGAGCTGG ACCGTGCTGG TGCCAGGACT CGTGGTCAGC
GGAGTCGGGG TCGGGCTGGC CACGCCGACG CTGGTGTCGA CGGCGGTCGC CGCGGTCGGG
TACCAGCGTG CGGGGATGGC CAGCGGCGCG GTGAACACGG CGCGGCAGCT GGGGAACGCG
CTGGGCATCG CGGTGCTCGG GGTGGTGTTC CACGCCGGGC TGGCTTCCTC GGTGCGGGGT
GCGGGCGTGC CGCAGTCGGC GGCGGTCGCC GACGCGCTGG CGGCTGGGCA GACCCGCGGC
GTGCTGGCAT CGGGACCGGC CGCGCAACGA CCCGCGCTGG AGCACATGGT GCACGCGGCG
TTCGCCTCCG GGCTGCGCTC GGCGTTCCTG GCGGCAGCCG TCATGGGAGC GGTCGGCGGC
CTCGCGGTGC TGGCGCTCGT GCGGCGGCCC GGCGGCGGTC ACGCACCGGG GGAGCAGTCG
AGCGCTGCGA ACGTGCCGAT CCCCGCCGAG GCGTGA
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| Protein sequence | MRKWLPLVAV CLGTFMLLVD VTIVTVALPD MARSLDTTFA DLQWVMDVYA LVLAALLLAA
GSLGDRAGHR RLYVAGLVVF AAASLACGLA TSPGVLIAFR AVQGVGGAAM LATTVALISH
LYSGRDLGTA FGVWGAVSGA AAAAGPIMGG LLTQHLDWRW IFFVNLPISV AAVAMTLRYV
GESRGERRRG LDLPGLLTFT AAAGLATYAL IKGNDYGWGS ARTIGVFAGA AVALVAFVVA
ELRVRTPLLD LSLFRRGTFT GVMIGALLLS GAAFSYFAYE SLWLQSALGM SPVTAGLCFV
PMSGAAFVTA GLGGRLLEDR LSPRVMIGGG LLLIAAGSAA QMLVSAGSSW TVLVPGLVVS
GVGVGLATPT LVSTAVAAVG YQRAGMASGA VNTARQLGNA LGIAVLGVVF HAGLASSVRG
AGVPQSAAVA DALAAGQTRG VLASGPAAQR PALEHMVHAA FASGLRSAFL AAAVMGAVGG
LAVLALVRRP GGGHAPGEQS SAANVPIPAE A
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