Gene Caci_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0346 
Symbol 
ID8331673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp387837 
End bp388442 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content69% 
IMG OID644953513 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003111140 
Protein GI256389576 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.824785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.03301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGC GGTCCCAGAT CCTGGAACTG GCCGTCCTCG GCCTGCTCCA CGAGCACCCG 
ATGCACGGCT ATGAGCTGCG CCGCCAGCTC AACGTGCAGC TCGGCGCCTT CCGCGCGCTG 
TCCTACGGGA CGCTGTACCC CTGTCTGAAG GACCTGGTCG CCCGAGGCTG GATCGCCGAG 
GACGACACCC AGACGGCCAA CGTCGCCGCC TCGCGCCGCG CCAAGATCAG CTACAAGCTG 
ACCGCGGAGG GCAAGGAGCG GTTCCAGGAG CTCATGACGA CCTCCGGTTC GGCGGCCTGG 
GAGGACGACA ACTTCGGCGT CCACTTCGCG TTCTTCGGAC GGACCAACGC CGGCGTCCGG 
ATCCGCATCC TCGAAGGGCG GCGCAGCCGT CTGGAGGAGC GGATGGAGGC GGTGCGCACC 
TCGCTCGCCC GCAGCCGCGA CCGGCTGGAC TCCTACACCC TGGAGCTTCA GCGGCACGGC 
TTGGAGAGCA CCGAGCGCGA GGTCAGATGG CTCAACGAGC TCATCAGGAC CGAGCACGAG 
CAGGCGTTCC CGGCGCCACC GCAGCAGCAA CCCCAGCAAG GCTCCCCGGA GCCCCGGCCC 
TCCTAG
 
Protein sequence
MAKRSQILEL AVLGLLHEHP MHGYELRRQL NVQLGAFRAL SYGTLYPCLK DLVARGWIAE 
DDTQTANVAA SRRAKISYKL TAEGKERFQE LMTTSGSAAW EDDNFGVHFA FFGRTNAGVR 
IRILEGRRSR LEERMEAVRT SLARSRDRLD SYTLELQRHG LESTEREVRW LNELIRTEHE 
QAFPAPPQQQ PQQGSPEPRP S