Gene Caci_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0345 
Symbol 
ID8331672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp384476 
End bp387439 
Gene Length2964 bp 
Protein Length987 aa 
Translation table11 
GC content67% 
IMG OID644953512 
Productglycosyl transferase family 51 
Protein accessionYP_003111139 
Protein GI256389575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0145524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC ACGGCAGTCG GCGCGGCGGA GGTGGCGGCG GCGGATCACG GGGACGCCGG 
TCGGCCGGCG GCGGCGGCTT CTCCGACAAG CTCGACGGGC TCGCCCACCA ACTCTCGGGG
ATGTTCGGCA AGCGCGGCGC GGGCCGCCGC GGCGACGACG GCTACGACGA GTACGGGTCC
TACGACGACC GCGGCTACGG CGAGGAGCCC TACGACGACG GCTACGGCGC CGAGCCGGCC
GACGTCGCCG TCGGCGGACG GCGCGGGCTG GGACGGCGCA CCGCGGCCGG CTCCGGCGGC
GCGGGCCGCG GCGGACGCCC GGGCGGCTCC GGCCGCAAGG ACGGGCTGCC GCCCAAAGAC
TGGTGGATGA AGTTCATCAA CTACCCGCGC TACGGCAAGC GCGGGTGGCG GCACTGGATG
CCCTCCATCA AGCAGGTCCT GTCGATTTTC CTGGGCTTCC TTTTCGTGGT CATAGGCGGC
GTGGCGTACG TCTACGCCAG CACGCAGATC CCGCAGGTCA AGAACAGCAT CGCGGCCGGC
AACCCGACGT ACTACACCTA TGACGACGGC AAAGAGCAGT TCGCCAACAT CGGCGTGAAC
TACTACCAGG TCAACGACAT AAACACGATC CCGAAGGTGT TCCAGAACGC GTTCGTGGCG
GCGGAGAACT ACTCCTTCTG GTCCGACCCC GGCGTGTCGT TCACCGGTGT GGCCCGCTCG
GCGCTCAACG ACCTGTTCGG CAGCGGCGGC ACGCAGGGCG GCTCGACGAT CACCCAGCAG
TACGTGAAGA ACGCGTACCT GTCGCAGGAC CAGACGCTGG GCCGCAAGGT CAACGAGATC
ATGATCTCCA TAAAGCTCAA CCACACGGAG AGCAAGCAGC AGATCCTGCT CGGCTACCTG
AACCAGATCT CGTTCGGGCG CGGCGCCTAC GGCATCGACG CGGCCTCCCG GGCCTACTTC
GGCCACCCGA TCAACCAGAT GACCGACGCC AACGTCGGCG AGGCCGCGTT CCTGGCCGCG
CTGGTCAACG ACCCCAGCAA CTTCTCCACC GCGCTGGCCA ACGGCAAGGC GCGCACCGAC
AACCCCAAGA CGTTCGACCG TTTCGAGAAG CGGTACAACG CGATCCTGGC GAACATGTCG
CAGTACGGAT TCGTGCCGAA GACGACGACC GCGCCGCTGG AGAACAAGCT GCCGAACGTC
ATCGACTTCA AGGGTCCGAA CCTGGGCCAG TACGTCGGGT ACATGAAGGA CGCCGCGACG
GCGTTCCTCG CCGCGCAGAT GCAGGAGTAC CCCAGCGACC CGACGACGCA GAAGTACGCG
AACATCGACA ACCTGTCCAA GGGCGGGTAC AAGATCGTCA CCACGTACAA CCATGTGATG
ATGAACGACT CGGTCACCGC GGCGAACGCG CTGTGGACCG GGACCAGCGG TGGCGGCGGC
GGGAAGCTGA ACCCGAAACA CGCCTCCGAC CACGACATCC ATCTGGCGTT CGCGTCTGTG
GATCCGCACA CCGGCGAGCT GAAGTCGTTC TACACCGGTA CCGACGGTAA AGAGGACTAC
GGCTCCAACG CGTTCAACTA CGCGCTGCAA GGCGGCGTGC AGGTCGGCTC GACGTTCAAG
CCGATCACGC TGGCGACCGC GCTGCAGTCC GGCAAGTTCT CGCTGGACAG CCAGGAACCG
GGCACCAACG AGAAGCCGCT GTTCCTGCCG GGCTCGAAGC AGCCGATCAC CTTCTACGAC
ACCTCCTTGC ACAAGACCGC GTTCTGGCCG CCCAACGAGG ACGAGGAAGC CCCGCCGAAC
GGCGGCAGCA CCACCCTGAA GCAGGGCCTT GCGATGTCGC TGAACTCTGT GTTCGCGGCG
CTGGAGCTGG ACCCGGCGGT CGGGATGGAC GCGGTCTACA ACATGGCCGA GCAGCTCGGC
ATCAAGCCCG GCACCCCCGA CTTCCTGAAG GTCGCCTCGC TGACCCTGGG CACCGCCGAG
ATCACGCCGA TGCGCATGGC CAACGTCTAC GGCGCCTTCG CCAACGGCGG CGTGTCGCAC
GAGCCGGTGC AGGTCACCGC GATCATCGAC CAGCGCACCG GGCAGACCGT CTGGACTCCC
CCGGCCCTGC GGTCGAACAG CGGGGTCAAC AAGCAGGTGA TGTCCGTGAA CACCGCCGCC
GGCGTCACCA ACGCGCTGCA GTCGGTCCTT CAGAAGGGCG GCACGGCCAA CGCGAACCAC
GACGCGGCCG CCCTGGCCGC CGAGGCGAAC TACAACCTGG CCGGCAAGAC CGGTACCACC
GACAGCAACC ACTCGGCCTG GTTCACCGGC TTCTCCACCT CCCTGGCGAC CTCGGTGGCG
ATCTTCAGAT CCACGGCGGA CGGAACCCTG GAGTCGATCA AGGGTCTGGG CTACAACGAT
CAATCGACCC GCATCAACGG TATGGACTGG CCCACGACGG TCTGGTCGGC GTTCATGAAG
ATCGAACTGG ACAAGAACAA GAGCGGCTTC GCCAAACCGT TCCCGCCGTA CGCGCCGACC
TGTTCCGGTG TCAGCGACAT CCCGAGCTTC CCCAACCAGT CGGTCGCGCC CGGCACGCTG
GCCTCCGGCT CGCTCCCCGG CACGCCGACC GGCTCGGAGG CGAACTGCCA GTCGGTGTTC
GTCCCGACGC CGACCCCGAC GCCGACGCCC ACCCCGACGA AGCCGACGAC ATCCACGCAG
GCGCCGCTGT GCACCCTGCC GATGGTGTTC GACCCGGCGT CGCAGCAGTG TGTGGTGGTG
CCCCCGACCT CGACGGACAC CAGTACGCAG CAGCAGCCGA CCGGCACCGG CACGTCGAAC
CCCACCGGTC CGGGCCAGCC GACCACCAGC CCGACCACGC CGTCGAGCAG GTGCAGCAGG
AACCCGCAAC AACCCGGGTG TCAGACGACG TCGCCGACGA CGTCCAGCAC CTCGAGCCTG
AGCGGTTTCC CGCCCGCGGG CTGA
 
Protein sequence
MSEHGSRRGG GGGGGSRGRR SAGGGGFSDK LDGLAHQLSG MFGKRGAGRR GDDGYDEYGS 
YDDRGYGEEP YDDGYGAEPA DVAVGGRRGL GRRTAAGSGG AGRGGRPGGS GRKDGLPPKD
WWMKFINYPR YGKRGWRHWM PSIKQVLSIF LGFLFVVIGG VAYVYASTQI PQVKNSIAAG
NPTYYTYDDG KEQFANIGVN YYQVNDINTI PKVFQNAFVA AENYSFWSDP GVSFTGVARS
ALNDLFGSGG TQGGSTITQQ YVKNAYLSQD QTLGRKVNEI MISIKLNHTE SKQQILLGYL
NQISFGRGAY GIDAASRAYF GHPINQMTDA NVGEAAFLAA LVNDPSNFST ALANGKARTD
NPKTFDRFEK RYNAILANMS QYGFVPKTTT APLENKLPNV IDFKGPNLGQ YVGYMKDAAT
AFLAAQMQEY PSDPTTQKYA NIDNLSKGGY KIVTTYNHVM MNDSVTAANA LWTGTSGGGG
GKLNPKHASD HDIHLAFASV DPHTGELKSF YTGTDGKEDY GSNAFNYALQ GGVQVGSTFK
PITLATALQS GKFSLDSQEP GTNEKPLFLP GSKQPITFYD TSLHKTAFWP PNEDEEAPPN
GGSTTLKQGL AMSLNSVFAA LELDPAVGMD AVYNMAEQLG IKPGTPDFLK VASLTLGTAE
ITPMRMANVY GAFANGGVSH EPVQVTAIID QRTGQTVWTP PALRSNSGVN KQVMSVNTAA
GVTNALQSVL QKGGTANANH DAAALAAEAN YNLAGKTGTT DSNHSAWFTG FSTSLATSVA
IFRSTADGTL ESIKGLGYND QSTRINGMDW PTTVWSAFMK IELDKNKSGF AKPFPPYAPT
CSGVSDIPSF PNQSVAPGTL ASGSLPGTPT GSEANCQSVF VPTPTPTPTP TPTKPTTSTQ
APLCTLPMVF DPASQQCVVV PPTSTDTSTQ QQPTGTGTSN PTGPGQPTTS PTTPSSRCSR
NPQQPGCQTT SPTTSSTSSL SGFPPAG