Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0345 |
Symbol | |
ID | 8331672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 384476 |
End bp | 387439 |
Gene Length | 2964 bp |
Protein Length | 987 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644953512 |
Product | glycosyl transferase family 51 |
Protein accession | YP_003111139 |
Protein GI | 256389575 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0145524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC ACGGCAGTCG GCGCGGCGGA GGTGGCGGCG GCGGATCACG GGGACGCCGG TCGGCCGGCG GCGGCGGCTT CTCCGACAAG CTCGACGGGC TCGCCCACCA ACTCTCGGGG ATGTTCGGCA AGCGCGGCGC GGGCCGCCGC GGCGACGACG GCTACGACGA GTACGGGTCC TACGACGACC GCGGCTACGG CGAGGAGCCC TACGACGACG GCTACGGCGC CGAGCCGGCC GACGTCGCCG TCGGCGGACG GCGCGGGCTG GGACGGCGCA CCGCGGCCGG CTCCGGCGGC GCGGGCCGCG GCGGACGCCC GGGCGGCTCC GGCCGCAAGG ACGGGCTGCC GCCCAAAGAC TGGTGGATGA AGTTCATCAA CTACCCGCGC TACGGCAAGC GCGGGTGGCG GCACTGGATG CCCTCCATCA AGCAGGTCCT GTCGATTTTC CTGGGCTTCC TTTTCGTGGT CATAGGCGGC GTGGCGTACG TCTACGCCAG CACGCAGATC CCGCAGGTCA AGAACAGCAT CGCGGCCGGC AACCCGACGT ACTACACCTA TGACGACGGC AAAGAGCAGT TCGCCAACAT CGGCGTGAAC TACTACCAGG TCAACGACAT AAACACGATC CCGAAGGTGT TCCAGAACGC GTTCGTGGCG GCGGAGAACT ACTCCTTCTG GTCCGACCCC GGCGTGTCGT TCACCGGTGT GGCCCGCTCG GCGCTCAACG ACCTGTTCGG CAGCGGCGGC ACGCAGGGCG GCTCGACGAT CACCCAGCAG TACGTGAAGA ACGCGTACCT GTCGCAGGAC CAGACGCTGG GCCGCAAGGT CAACGAGATC ATGATCTCCA TAAAGCTCAA CCACACGGAG AGCAAGCAGC AGATCCTGCT CGGCTACCTG AACCAGATCT CGTTCGGGCG CGGCGCCTAC GGCATCGACG CGGCCTCCCG GGCCTACTTC GGCCACCCGA TCAACCAGAT GACCGACGCC AACGTCGGCG AGGCCGCGTT CCTGGCCGCG CTGGTCAACG ACCCCAGCAA CTTCTCCACC GCGCTGGCCA ACGGCAAGGC GCGCACCGAC AACCCCAAGA CGTTCGACCG TTTCGAGAAG CGGTACAACG CGATCCTGGC GAACATGTCG CAGTACGGAT TCGTGCCGAA GACGACGACC GCGCCGCTGG AGAACAAGCT GCCGAACGTC ATCGACTTCA AGGGTCCGAA CCTGGGCCAG TACGTCGGGT ACATGAAGGA CGCCGCGACG GCGTTCCTCG CCGCGCAGAT GCAGGAGTAC CCCAGCGACC CGACGACGCA GAAGTACGCG AACATCGACA ACCTGTCCAA GGGCGGGTAC AAGATCGTCA CCACGTACAA CCATGTGATG ATGAACGACT CGGTCACCGC GGCGAACGCG CTGTGGACCG GGACCAGCGG TGGCGGCGGC GGGAAGCTGA ACCCGAAACA CGCCTCCGAC CACGACATCC ATCTGGCGTT CGCGTCTGTG GATCCGCACA CCGGCGAGCT GAAGTCGTTC TACACCGGTA CCGACGGTAA AGAGGACTAC GGCTCCAACG CGTTCAACTA CGCGCTGCAA GGCGGCGTGC AGGTCGGCTC GACGTTCAAG CCGATCACGC TGGCGACCGC GCTGCAGTCC GGCAAGTTCT CGCTGGACAG CCAGGAACCG GGCACCAACG AGAAGCCGCT GTTCCTGCCG GGCTCGAAGC AGCCGATCAC CTTCTACGAC ACCTCCTTGC ACAAGACCGC GTTCTGGCCG CCCAACGAGG ACGAGGAAGC CCCGCCGAAC GGCGGCAGCA CCACCCTGAA GCAGGGCCTT GCGATGTCGC TGAACTCTGT GTTCGCGGCG CTGGAGCTGG ACCCGGCGGT CGGGATGGAC GCGGTCTACA ACATGGCCGA GCAGCTCGGC ATCAAGCCCG GCACCCCCGA CTTCCTGAAG GTCGCCTCGC TGACCCTGGG CACCGCCGAG ATCACGCCGA TGCGCATGGC CAACGTCTAC GGCGCCTTCG CCAACGGCGG CGTGTCGCAC GAGCCGGTGC AGGTCACCGC GATCATCGAC CAGCGCACCG GGCAGACCGT CTGGACTCCC CCGGCCCTGC GGTCGAACAG CGGGGTCAAC AAGCAGGTGA TGTCCGTGAA CACCGCCGCC GGCGTCACCA ACGCGCTGCA GTCGGTCCTT CAGAAGGGCG GCACGGCCAA CGCGAACCAC GACGCGGCCG CCCTGGCCGC CGAGGCGAAC TACAACCTGG CCGGCAAGAC CGGTACCACC GACAGCAACC ACTCGGCCTG GTTCACCGGC TTCTCCACCT CCCTGGCGAC CTCGGTGGCG ATCTTCAGAT CCACGGCGGA CGGAACCCTG GAGTCGATCA AGGGTCTGGG CTACAACGAT CAATCGACCC GCATCAACGG TATGGACTGG CCCACGACGG TCTGGTCGGC GTTCATGAAG ATCGAACTGG ACAAGAACAA GAGCGGCTTC GCCAAACCGT TCCCGCCGTA CGCGCCGACC TGTTCCGGTG TCAGCGACAT CCCGAGCTTC CCCAACCAGT CGGTCGCGCC CGGCACGCTG GCCTCCGGCT CGCTCCCCGG CACGCCGACC GGCTCGGAGG CGAACTGCCA GTCGGTGTTC GTCCCGACGC CGACCCCGAC GCCGACGCCC ACCCCGACGA AGCCGACGAC ATCCACGCAG GCGCCGCTGT GCACCCTGCC GATGGTGTTC GACCCGGCGT CGCAGCAGTG TGTGGTGGTG CCCCCGACCT CGACGGACAC CAGTACGCAG CAGCAGCCGA CCGGCACCGG CACGTCGAAC CCCACCGGTC CGGGCCAGCC GACCACCAGC CCGACCACGC CGTCGAGCAG GTGCAGCAGG AACCCGCAAC AACCCGGGTG TCAGACGACG TCGCCGACGA CGTCCAGCAC CTCGAGCCTG AGCGGTTTCC CGCCCGCGGG CTGA
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Protein sequence | MSEHGSRRGG GGGGGSRGRR SAGGGGFSDK LDGLAHQLSG MFGKRGAGRR GDDGYDEYGS YDDRGYGEEP YDDGYGAEPA DVAVGGRRGL GRRTAAGSGG AGRGGRPGGS GRKDGLPPKD WWMKFINYPR YGKRGWRHWM PSIKQVLSIF LGFLFVVIGG VAYVYASTQI PQVKNSIAAG NPTYYTYDDG KEQFANIGVN YYQVNDINTI PKVFQNAFVA AENYSFWSDP GVSFTGVARS ALNDLFGSGG TQGGSTITQQ YVKNAYLSQD QTLGRKVNEI MISIKLNHTE SKQQILLGYL NQISFGRGAY GIDAASRAYF GHPINQMTDA NVGEAAFLAA LVNDPSNFST ALANGKARTD NPKTFDRFEK RYNAILANMS QYGFVPKTTT APLENKLPNV IDFKGPNLGQ YVGYMKDAAT AFLAAQMQEY PSDPTTQKYA NIDNLSKGGY KIVTTYNHVM MNDSVTAANA LWTGTSGGGG GKLNPKHASD HDIHLAFASV DPHTGELKSF YTGTDGKEDY GSNAFNYALQ GGVQVGSTFK PITLATALQS GKFSLDSQEP GTNEKPLFLP GSKQPITFYD TSLHKTAFWP PNEDEEAPPN GGSTTLKQGL AMSLNSVFAA LELDPAVGMD AVYNMAEQLG IKPGTPDFLK VASLTLGTAE ITPMRMANVY GAFANGGVSH EPVQVTAIID QRTGQTVWTP PALRSNSGVN KQVMSVNTAA GVTNALQSVL QKGGTANANH DAAALAAEAN YNLAGKTGTT DSNHSAWFTG FSTSLATSVA IFRSTADGTL ESIKGLGYND QSTRINGMDW PTTVWSAFMK IELDKNKSGF AKPFPPYAPT CSGVSDIPSF PNQSVAPGTL ASGSLPGTPT GSEANCQSVF VPTPTPTPTP TPTKPTTSTQ APLCTLPMVF DPASQQCVVV PPTSTDTSTQ QQPTGTGTSN PTGPGQPTTS PTTPSSRCSR NPQQPGCQTT SPTTSSTSSL SGFPPAG
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