| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0323 |
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| Symbol | |
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| ID | 8331650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 362213 |
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| End bp | 363790 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644953490 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003111117 |
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| Protein GI | 256389553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.853677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA ACAGCCCGCC GTCCGGCCGA CGGCAGCGCC TGATCCTGAC CGTCCTGATC
TTCGCGCAGC TCCTGATCTG GATCGACGGC ACCGTCCTGT CCACCGCCTA CGAAACCCTC
GCCGACCCGG TCCGCGGCCT GGGCGCCACT CCCGGCCAGC TCCAGTGGGC CACCGGCTCC
TACACGCTGG TCCTGGCCAC CGTCACCTTC ACCGGCGGCG CCCTCGGCGA CCGCTTCGGG
CATCGCAACA CCCTGCTGGC CGGCATGGCG CTGTTCGGAC TGGCCTCAGT GTTCGCCGCG
TACTCGCAGA ACACCGGGCA GCTCATCGCG GCCCGCGCCG TCATGGGCCT GGGCGCCGCG
CTGCTGATCC CGGCGACGCT GGCGGTGATC AGCTTCACCT ACCCGCCCGA GCAGCGCCCG
CAGGCCTTCG GCGTGCTCAG CAGTTTCGCC GGGGTGGGCA TCGCCGCCGG ACCGGTGCTG
GCCGGTCTGA TGCTGGCGAA CTTCTGGTGG GGCTCGGTGT TCCTGATCAA CGTGCCGGTG
GTGGTGCTCG GCCTGGTCGC GATCGCCCGG ACCGTGCCGA ACTTCCAGCC GCCGGCCAAG
CGAGGACTGG ACTTCCCCGG TCTGCTGCTC TCCTCCGCCG GCCTCGGTCT GCTGTCCTAC
GGCCTGATCC GGGCCGGGCA GGACGGCACC GTGACCGAAC CGCAGGTATG GATCACCGTC
GCCGGCGGGC TGGTGGTGAC CGCCGCGTTC GTGGTCGTGG AGCTGCGCCG CCGACACCCG
AGCTTCGACC CGCGGCTGTT CCGCCTGCGC CAGTTCGCCG CCGGCAACGT CTCCCTGACG
CTGCTGTTCC TCGCCTTGAG CGCGAGCGGT TTCTACTTCG CCTTCTACCT CCAAGGCGCC
CGCGGCTACT CGGCCCTGCG CGCCAGCCTG GTCGGCATCC CCGGCGCGCT CGGCGTCGTC
ATCGGCGGAC CGGTCGCCGC GAAGCTCGCG CGCCGTACCT CGGTCCGCCG GGTCAGCGGC
ACCGCGTTGA CGGTCTCCAC GATCACGCTC CTGGTCTTCT CCCGGGTCGG CCTCGGGTTG
CCGATCCCCG CCTACATCGC CGTGTCGATC GTCCAGGCCA CCGCGATCGG CATGACCATC
GCCCCGCTGA CCGGCGCGAT CCTCGGCTCG CTGCCGCTGG CCCAAGCCGG GGCGGGCAGC
GCGGTGAACG CCACCATGCG CCAGACCGGC AGCGTGCTGG GCATCGCGCT CGGCGGCACG
ATCCTGTCGA TCGGATACCG GCACGCGATC GGCGGCTCGG TGGCCGCCCT GCCCGCGCCA
CTGAAACAGC AGGCTGAGAC GTCCGCCGAG ATGGCCCGGA ACGTCGCGCG GCACAACGGG
ATCCCGAACC TGGCGCATCA GGCGGACCTC GCGTTCGTGC ACGCGATGCA CACCGGAATG
GTGTGGTCGG CGGCGGCGAC CGGGATCGGG GCGCTGCTGG TGTTCGGCGC GTTCGCGAAC
CCCAGGAAGA CCAAGACCGA GGCGGTCACG GCACAGCTTG AGGCATCGAC AGTGGTTCCG
GAATCGGCTT CGGCATAG
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| Protein sequence | MSTNSPPSGR RQRLILTVLI FAQLLIWIDG TVLSTAYETL ADPVRGLGAT PGQLQWATGS
YTLVLATVTF TGGALGDRFG HRNTLLAGMA LFGLASVFAA YSQNTGQLIA ARAVMGLGAA
LLIPATLAVI SFTYPPEQRP QAFGVLSSFA GVGIAAGPVL AGLMLANFWW GSVFLINVPV
VVLGLVAIAR TVPNFQPPAK RGLDFPGLLL SSAGLGLLSY GLIRAGQDGT VTEPQVWITV
AGGLVVTAAF VVVELRRRHP SFDPRLFRLR QFAAGNVSLT LLFLALSASG FYFAFYLQGA
RGYSALRASL VGIPGALGVV IGGPVAAKLA RRTSVRRVSG TALTVSTITL LVFSRVGLGL
PIPAYIAVSI VQATAIGMTI APLTGAILGS LPLAQAGAGS AVNATMRQTG SVLGIALGGT
ILSIGYRHAI GGSVAALPAP LKQQAETSAE MARNVARHNG IPNLAHQADL AFVHAMHTGM
VWSAAATGIG ALLVFGAFAN PRKTKTEAVT AQLEASTVVP ESASA
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