Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0314 |
Symbol | |
ID | 8331641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 353797 |
End bp | 355236 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953481 |
Product | sugar transporter |
Protein accession | YP_003111108 |
Protein GI | 256389544 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA GGACCGGCCG CGAGAGCGGT CCCAACCCGC CGGGCGATTC CGCGGCGGCC CGCGTCGCGC CGCGCATCGT GTTCATCGCT GCCGCCGCGG CCTTGGGCGG CTTCCTGTTC GGCTACGACT CCGCGGTGAT CAACGGCGCG GTCACCGGGA TCCAGCACGA CTTCAACGTC GGCAGCGGGA CGACCGGCTT CGTCGTCGCC GCGGCCCTGC CCGGCGCCGC CGCCGGGGCG ATCGCCGGCG GCTGGATGGC CGACCGGATC GGCCGGATCC GCGCCATGCA GATCGCGGCG GTCCTGTTCA TCATCAGCGG CATCGGCAGC ATGTTCGCCT TCCAGCCCTG GGACCTGACG ATCTGGCGCA TCCTCGGCGG CTTCGCTATC GGCATCGCCT CGGTGATCGG CCCGGCCTAC ATCGCCGAGG TCTCCCCGCC GGCCTTCCGC GGCCGGCTGA CCTCCTTCCA GCAGCTGGCG ATCGTGCTGG GCATCGCGAT CTCCGCGCTC GTCAACTATC TGATCAACCA GTGGGCCGGC GGCACCAACA CTGACCACCT CGGCGGGCTG GCCGCCTGGC GCTGGATGCT CGGCGCCGAG GTGATCCCGG CGATCTTGTA CGGCGTGCTG AGCACGATGA TCCCGGAGTC GCCGCGCTTC CTGGTCGCGA ACGGCGAGGA CGACCGGGCC CGCGAGGTGC TCGCCGAGGT CGAGGGCACA CACGCGAACG TCGCCGACCG CATCGCCGAG ATCCGCGATC AGCTGGCCGG GGAGGTCAAA CCGAAGCTGG CGGACCTGCT CACCCCGAGC CGGAAGAACC TGCTGGCGGT GGTCTGGATC GGCATCGGAC TCTCGGTGCT GCAACAGTTC GTCGGCATCA ACGTGATCTT CTATTACAGC TCCCTGCTGT GGCAGTCGGT CGGCATCGAC ACCTCCAACT CGCTGCTGAT CTCGATGATC TCCGCGGCGG TGAACATCGC CGGCACCGTG GTGGCGATGG CGCTGGTGGA CCGGATCGGC CGGCGTCCGC TGCTGCTGAT CGGCTCGGTG GGGATGGCGG TGACGCTGGG GCTGTGCGCC TGGATGTTCT CCTACGGCAC GCACGCCAAC GGCAAGACCA CCCTGCCGAA GGCCCAGGGC GTCACGGCGC TGCTCGGCGC GAACGCCTAC GTGTTCTTCT TCGCGATGTC CTGGGGCGTC GTGGTCTGGG TGCTGCTCGG CGAGATGTTC CCGAACCGGA TCCGCGCCGT GGCGCTGTCG GTCGCGGCCA GCGCGCAGTG GCTGGCGAAC TGGTTGGTGA CGGTCTCGTT CCCGTCGCTG TCCCGCTGGA GCCTGGCCGG GGCGTACTCG CTCTACGCGA TCGCGGCGGC GGTCTCCATC CCCTTCGTGT ACTACCTTGT CCGGGAAACG AAGGGAAAAA CCTTGGAATC GATGGGATAG
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Protein sequence | MTTRTGRESG PNPPGDSAAA RVAPRIVFIA AAAALGGFLF GYDSAVINGA VTGIQHDFNV GSGTTGFVVA AALPGAAAGA IAGGWMADRI GRIRAMQIAA VLFIISGIGS MFAFQPWDLT IWRILGGFAI GIASVIGPAY IAEVSPPAFR GRLTSFQQLA IVLGIAISAL VNYLINQWAG GTNTDHLGGL AAWRWMLGAE VIPAILYGVL STMIPESPRF LVANGEDDRA REVLAEVEGT HANVADRIAE IRDQLAGEVK PKLADLLTPS RKNLLAVVWI GIGLSVLQQF VGINVIFYYS SLLWQSVGID TSNSLLISMI SAAVNIAGTV VAMALVDRIG RRPLLLIGSV GMAVTLGLCA WMFSYGTHAN GKTTLPKAQG VTALLGANAY VFFFAMSWGV VVWVLLGEMF PNRIRAVALS VAASAQWLAN WLVTVSFPSL SRWSLAGAYS LYAIAAAVSI PFVYYLVRET KGKTLESMG
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