Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0296 |
Symbol | |
ID | 8331623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 333393 |
End bp | 334910 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953463 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_003111090 |
Protein GI | 256389526 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCACC CTTCCGGCTT CCGCCCCGGC GATGGCAGAC TCACCCACGA ACTCGACCCC CAGGACACCG GCCCGCAGGA CGCCTGCGGA GTCTTCGGCG TCTGGGCTCC CGGCGAAGAA GTCGCGAAGC TCGCGTACTT CGGCCTGTAC GCGCTGCAGC ACCGCGGCCA GGAATCCGCC GGCATCGCCG TGTCCAACGG CAAGCAGATC CTGGTCTACA AGGACATGGG CCTGGTCTCC CAGGTCTTCG ACGAGGCCAC CCTGCAGTCC CTGCAGGGCT ACCTGGCGAT CGGCCACGCG CGCTACTCCA CCACCGGCTC CTCGGTGTGG GAGAACGCGC AGCCGACCTT CCGGGCCACC GCGCACGGCG CCGTGGCCCT CGGCCACAAC GGCAACCTGA CCAACACCGG CGAGCTGGCC CGGCTGGCCG CCGAGCGGCG GACCACGTCC GGCGCCGGCG ACAAGCACGC CATGACCTCG GACACCGGGC TGATGACCGA GCTGCTGGCG TCCTACTCCG ACCGCTCCCT GGAGGACGCG GCCGCCGAGG TGCTGCCGCA GCTGCGCGGC GCCTTCTCCC TGGTGTTCAT GGACGAGACC ACGCTCTACG CGGCGCGCGA CCCGCAGGGT GTGCGGCCGC TGATGCTCGG CCGCCTGGAC CGCGGCTGGG TGGTGGCCTC CGAGCAGGCG GCGCTGGACA CCGTCGGCGC GAGCTTCATC CGCGAGATCG AGCCCGGCGA GCTGATCGCC GTCGACGAGA ACGGCCTGCG CTCCCGGCAC TTCGCCGAGC CCCAGCCCAA GGGCTGTGTC TTCGAGTACG TCTACCTGGC GCGCCCCGAC GCCACCATCT CCGGCCGCAA CGTGCACGCC GCGCGCGTGG AGATGGGCCG CACCCTGGCC CGCGAGGCGC CGGTGGAGGC CGACCTGGTC ATCGCCACGC CGGAGTCCGG CACCCCGGCC GCGATCGGCT TCGCCGAGGA GTCCGGCATC CCCTTCGGCC AGGGCTTCGT GAAGAACGCC TACGTCGGGC GCACCTTCAT CCAGCCCAGC CAGACGCTGC GCCAGCTCGG CGTGCGGCTG AAGCTGAACG CGCTGCGCGA GGTCATCGAG GGCAAGCGCC TGGTCGTGGT GGACGACTCG ATCGTGCGCG GCAACACCCA GCGCGCGGTG TCCAAGATGC TGCGCGAGGC CGGCGCCACC GAGGTCCACC TGCGGATCTC CTCCCCGCCG GTGAAGTGGC CGTGTTTCTA CGGCATCGAC TTCGCCACCC GCGCCGAGCT GATCGCCAAC GGCCTGAACA CCGACGAGAT CGCCAAGTCG ATCGGCGCCG ACTCGCTGGC CTACATCACC CTGGACGGCA TGACCGCGGC CACGCACCAG CCGGCCGACC GGCTGTGCCG CGCCTGCTTC GACGGCGTGT ACCCGATCGC GCTGCCCGAG GACGAGCTGC TGGGCAAGCA TCTCCTGGAG ATCTCGGTCG ACCCGCTGGC CCACACCGAC GCCCTGTCGC GCCCGTAG
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Protein sequence | MIHPSGFRPG DGRLTHELDP QDTGPQDACG VFGVWAPGEE VAKLAYFGLY ALQHRGQESA GIAVSNGKQI LVYKDMGLVS QVFDEATLQS LQGYLAIGHA RYSTTGSSVW ENAQPTFRAT AHGAVALGHN GNLTNTGELA RLAAERRTTS GAGDKHAMTS DTGLMTELLA SYSDRSLEDA AAEVLPQLRG AFSLVFMDET TLYAARDPQG VRPLMLGRLD RGWVVASEQA ALDTVGASFI REIEPGELIA VDENGLRSRH FAEPQPKGCV FEYVYLARPD ATISGRNVHA ARVEMGRTLA REAPVEADLV IATPESGTPA AIGFAEESGI PFGQGFVKNA YVGRTFIQPS QTLRQLGVRL KLNALREVIE GKRLVVVDDS IVRGNTQRAV SKMLREAGAT EVHLRISSPP VKWPCFYGID FATRAELIAN GLNTDEIAKS IGADSLAYIT LDGMTAATHQ PADRLCRACF DGVYPIALPE DELLGKHLLE ISVDPLAHTD ALSRP
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