| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0296 |
|---|
| Symbol | |
|---|
| ID | 8331623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 333393 |
|---|
| End bp | 334910 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953463 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_003111090 |
|---|
| Protein GI | 256389526 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCACC CTTCCGGCTT CCGCCCCGGC GATGGCAGAC TCACCCACGA ACTCGACCCC
CAGGACACCG GCCCGCAGGA CGCCTGCGGA GTCTTCGGCG TCTGGGCTCC CGGCGAAGAA
GTCGCGAAGC TCGCGTACTT CGGCCTGTAC GCGCTGCAGC ACCGCGGCCA GGAATCCGCC
GGCATCGCCG TGTCCAACGG CAAGCAGATC CTGGTCTACA AGGACATGGG CCTGGTCTCC
CAGGTCTTCG ACGAGGCCAC CCTGCAGTCC CTGCAGGGCT ACCTGGCGAT CGGCCACGCG
CGCTACTCCA CCACCGGCTC CTCGGTGTGG GAGAACGCGC AGCCGACCTT CCGGGCCACC
GCGCACGGCG CCGTGGCCCT CGGCCACAAC GGCAACCTGA CCAACACCGG CGAGCTGGCC
CGGCTGGCCG CCGAGCGGCG GACCACGTCC GGCGCCGGCG ACAAGCACGC CATGACCTCG
GACACCGGGC TGATGACCGA GCTGCTGGCG TCCTACTCCG ACCGCTCCCT GGAGGACGCG
GCCGCCGAGG TGCTGCCGCA GCTGCGCGGC GCCTTCTCCC TGGTGTTCAT GGACGAGACC
ACGCTCTACG CGGCGCGCGA CCCGCAGGGT GTGCGGCCGC TGATGCTCGG CCGCCTGGAC
CGCGGCTGGG TGGTGGCCTC CGAGCAGGCG GCGCTGGACA CCGTCGGCGC GAGCTTCATC
CGCGAGATCG AGCCCGGCGA GCTGATCGCC GTCGACGAGA ACGGCCTGCG CTCCCGGCAC
TTCGCCGAGC CCCAGCCCAA GGGCTGTGTC TTCGAGTACG TCTACCTGGC GCGCCCCGAC
GCCACCATCT CCGGCCGCAA CGTGCACGCC GCGCGCGTGG AGATGGGCCG CACCCTGGCC
CGCGAGGCGC CGGTGGAGGC CGACCTGGTC ATCGCCACGC CGGAGTCCGG CACCCCGGCC
GCGATCGGCT TCGCCGAGGA GTCCGGCATC CCCTTCGGCC AGGGCTTCGT GAAGAACGCC
TACGTCGGGC GCACCTTCAT CCAGCCCAGC CAGACGCTGC GCCAGCTCGG CGTGCGGCTG
AAGCTGAACG CGCTGCGCGA GGTCATCGAG GGCAAGCGCC TGGTCGTGGT GGACGACTCG
ATCGTGCGCG GCAACACCCA GCGCGCGGTG TCCAAGATGC TGCGCGAGGC CGGCGCCACC
GAGGTCCACC TGCGGATCTC CTCCCCGCCG GTGAAGTGGC CGTGTTTCTA CGGCATCGAC
TTCGCCACCC GCGCCGAGCT GATCGCCAAC GGCCTGAACA CCGACGAGAT CGCCAAGTCG
ATCGGCGCCG ACTCGCTGGC CTACATCACC CTGGACGGCA TGACCGCGGC CACGCACCAG
CCGGCCGACC GGCTGTGCCG CGCCTGCTTC GACGGCGTGT ACCCGATCGC GCTGCCCGAG
GACGAGCTGC TGGGCAAGCA TCTCCTGGAG ATCTCGGTCG ACCCGCTGGC CCACACCGAC
GCCCTGTCGC GCCCGTAG
|
|---|
| Protein sequence | MIHPSGFRPG DGRLTHELDP QDTGPQDACG VFGVWAPGEE VAKLAYFGLY ALQHRGQESA
GIAVSNGKQI LVYKDMGLVS QVFDEATLQS LQGYLAIGHA RYSTTGSSVW ENAQPTFRAT
AHGAVALGHN GNLTNTGELA RLAAERRTTS GAGDKHAMTS DTGLMTELLA SYSDRSLEDA
AAEVLPQLRG AFSLVFMDET TLYAARDPQG VRPLMLGRLD RGWVVASEQA ALDTVGASFI
REIEPGELIA VDENGLRSRH FAEPQPKGCV FEYVYLARPD ATISGRNVHA ARVEMGRTLA
REAPVEADLV IATPESGTPA AIGFAEESGI PFGQGFVKNA YVGRTFIQPS QTLRQLGVRL
KLNALREVIE GKRLVVVDDS IVRGNTQRAV SKMLREAGAT EVHLRISSPP VKWPCFYGID
FATRAELIAN GLNTDEIAKS IGADSLAYIT LDGMTAATHQ PADRLCRACF DGVYPIALPE
DELLGKHLLE ISVDPLAHTD ALSRP
|
|---|
| |