Gene Caci_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0288 
Symbol 
ID8331615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp325731 
End bp326642 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID644953455 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_003111082 
Protein GI256389518 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGCC GGTATTCTGA GCGCGTGATC ACCGGTCTGA ACCACCTCGC CAGCGGCAAG 
ATCCGCGACC TGTACGCGGT CGGCGACGAC CTGCTCCTCG TCGCCTCCGA CAAGATCTCC
GCCTTCGACT ACGTGCTGGA GTCCGAGATC CCGGACAAGG GCCGGATCCT CACCCAGCTG
TCCATGTGGT GGTTCCGCCA GCTCGCCGAC CTGGTGCCGA ACCATGTGAT CAGCGCCGAC
GTCGAGCAGT TCCCGGCGGA GTTGCAGCCC TACAAGGAGG AGCTGCGCGG GCGCTCGATG
CTCTGCCGCA AGCTGAGCAT GGTGCAGGTC GAGTGCGTGG CGCGCGGCTA CCTGACCGGC
TCCGGGCTGG CCGAGTACGA GCGGACCCGC ACCGCCAACG GCGTGCCGCT GCCGCCCGGG
CTGGTCGACG GCTCGCGGCT GGACCGCCCG ATCTTCACCC CGGCGATGAA GGCCGAGGTC
GGGCAGCACG ATGAGAACGT CAGCTTCGAG GACATGGCCG AGCGGATCGG CGACCCGGAG
CTGGCCGCGC AGCTGAAGGA CCTGACGCTG GCGGTCTACT CGCGGGCCCG CGAGATCGCC
GAGGAGCGCG GGATCATCCT GGCCGACACC AAGTTCGAGT TCGGGCGGCT GCGCGGCGGG
ACCCTGGTCC TCGCCGACGA GGTGCTGACC CCGGACTCCT CGCGTTTCTG GCCGGCGGAC
GAATGGAAGC CGGGACGCAC GCAGTCCTCG TTCGACAAGC AGTACGTCCG CGACTGGCTG
AGCTCCCCGG CCTCGGGCTG GGACCGCAAG TCCGACACCC CGCCGCCGGT GCTGCCGGAG
GAGGTCGTGC AGGCGACCCG GGCCCGCTAC GTCGAGGCCT ACGAGCGCCT CACCGGAGCG
AAGTTCGACT AG
 
Protein sequence
MNRRYSERVI TGLNHLASGK IRDLYAVGDD LLLVASDKIS AFDYVLESEI PDKGRILTQL 
SMWWFRQLAD LVPNHVISAD VEQFPAELQP YKEELRGRSM LCRKLSMVQV ECVARGYLTG
SGLAEYERTR TANGVPLPPG LVDGSRLDRP IFTPAMKAEV GQHDENVSFE DMAERIGDPE
LAAQLKDLTL AVYSRAREIA EERGIILADT KFEFGRLRGG TLVLADEVLT PDSSRFWPAD
EWKPGRTQSS FDKQYVRDWL SSPASGWDRK SDTPPPVLPE EVVQATRARY VEAYERLTGA
KFD