Gene Caci_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0243 
Symbol 
ID8331570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp273093 
End bp273794 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID644953410 
Productglycosyl transferase family 2 
Protein accessionYP_003111037 
Protein GI256389473 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.225314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGG AACCTGTCAC GGAGGTCACA TCGAGTGACG TCTTCGTCAT CATCCCGGCA 
TGGAACGAAC AGGAGCGGAT CGCCGCCACC GTGCGCGCCG CCGCCGCGCT GGGACCGGTG
CTGGTCATGG ACGACGGCTC CCGCGACGCG ACCACGCGCA TCGCGCGCCG CGCCGGCGCC
AGAGTCCTGA CCACGCGGAA CAACCTCGGC AAGGGCGCCG CGATGGCCGC CGGCGTCGCC
GCGCTCCCGC AGCAGGCGCG CTACGTCCTG TTCCTGGACG CCGACCTCGA AGACACCGCG
TCCCAGGCCG GACCGCTCGT CGACGCCGTC CGCTCCGGCA GCTGCGACAT GGCGATCGCG
CTCCCGCCGC CGCAGCCCGG CGGCGGCCAC GGTCTGGTCG TCGGTCTGGC CCGGGAGGGA
ATCAAAAGGC TGACGGGCTT CGACGCCGCC GCTCCGCTGT CCGGGCAGCG CTGCCTGACC
CGCGAGGCGG CGGAAGCGGT CCGCTACGCC GCGCGCTTCG GCGTCGAGGT CGGCCTCACC
ATCGACCTGC TCCGGGCCGG CTACGAGGTC GCTGAAGTCC CCGCGGACCT CCGGCACCGC
GTCACCGGCG AGGACTGGCG GTCCCAGATC CACCGGGCCC GCCAGTACCG CGACGTCCTG
CTGGCGCTCA GATCACGATC CCTGCCGCCC CGGAGTCCGT GA
 
Protein sequence
MEAEPVTEVT SSDVFVIIPA WNEQERIAAT VRAAAALGPV LVMDDGSRDA TTRIARRAGA 
RVLTTRNNLG KGAAMAAGVA ALPQQARYVL FLDADLEDTA SQAGPLVDAV RSGSCDMAIA
LPPPQPGGGH GLVVGLAREG IKRLTGFDAA APLSGQRCLT REAAEAVRYA ARFGVEVGLT
IDLLRAGYEV AEVPADLRHR VTGEDWRSQI HRARQYRDVL LALRSRSLPP RSP