| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0242 |
|---|
| Symbol | |
|---|
| ID | 8331569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 272436 |
|---|
| End bp | 273062 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953409 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003111036 |
|---|
| Protein GI | 256389472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.156746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA GCCGACACAG CGACGACAAG ATCCTGGACG CCGCGCAGAG CGCGCTGTTG
GATCTGGGAC TGCGCAACAC CACGCTCGCC GAGGTGGCAC GGCGGGCGGG CGCGTCCCGG
ATGACCTTGT ACCGGCGCTA TCCCGACATC GACGCCCTGC TCACCGAGGT GCTGGGGCGC
CAGCTGATCC GGGTGGTACG GCGCAACGCC GGGCTGCAGG AGCTGGCCGG CGGCGGCCGC
AGCGCCCGCG ACCTGCTGGT CACCGGGACC GTCGAGGTGG TGCGGGCGTT CCACGGCGAC
CTGCTGATGC ACAAGATCCT GGAGTCCGAC GCCGAGTTCC TGCTGCCCTA CATGACCCGC
GAGTTCGGGC CGCTCCAGCA CTACGCGCTG GACCTGCTGT CGATGCGGCT GGAGCAAGGG
CACGAAGACA CCTCGATCCG GCACGGGTCG GTCGCTCTGC AGGCGCGGAC GGTGCTGCTG
ACGGCGCAGT CGTTCGTGAT CTCGGCGCGC GCCGCCGGTT CGGTGCCGAT GGACCGGTTG
CTGGAGGAGC TCCGCGAGAT GCTGGACGCG TATCTGCGGC CGAGCGCGGA CGGCGCGCAG
GCACCGGATC CGGAGCCCGC CGTGTAA
|
|---|
| Protein sequence | MDASRHSDDK ILDAAQSALL DLGLRNTTLA EVARRAGASR MTLYRRYPDI DALLTEVLGR
QLIRVVRRNA GLQELAGGGR SARDLLVTGT VEVVRAFHGD LLMHKILESD AEFLLPYMTR
EFGPLQHYAL DLLSMRLEQG HEDTSIRHGS VALQARTVLL TAQSFVISAR AAGSVPMDRL
LEELREMLDA YLRPSADGAQ APDPEPAV
|
|---|
| |