Gene Caci_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0238 
Symbol 
ID8331565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp266366 
End bp267253 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID644953405 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003111032 
Protein GI256389468 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.112494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGTCG TCATGTCGGT GCAACCGGAG AGTCCCCGGA AATCAGTGAG TTTGTCCACG 
ACGGTCACAC GCGCCCCGGC GCCACGGCCC GCGGACAGCA GAGGCACGGG CGGGACCGAG
TTCCCGTACA CACCCGAAAG CGTCGGCACG GCCCGCCACG CGCTGGCCGA CGCACTCCAG
CGCATGCGCG TGGCACCCCC AGCCGCGGAC GACGCGGTCC TGATCCTCTC GGAACTGGTG
AGCAACGCCC TCCGGCACGC CCTACCGCTG GCCGGCGGCA CCATCCGAGT CGCCTGGTGG
ATGGCCGACG ACAAGGTCCT GCGCATAGCC GTGACCGACG GCGGCCGCCA ACAACCGGGC
CAAGCACCAC CACTCAAAGC CGCAGAAGCC CCCGACCTGG TGGCACCCGA CCTCGACGAC
ATCGACGAAT CCGCCGTGGA CGGCCGCGGA CTCGGCATCG TGGGCCTCCT GGCCGACGCC
TGGGGCGTCG AACCCTGGTA CGCCCCCGAA ACAGAAGCAA CGAGCCCCTA TCTACACGCC
GCCACCACAT CAGCGACGGC ATCAGCGGCA TCATCGGCGG CGACATCCCG CGCTATTCAC
CCGGACCCCA GCGCCCCCAA AACAGTCTGG GCAGCAGTCC GCCTCCACGC CCGCCACGCA
GCGCCCCCAC CCCCCGACGA CCAAGACCGC CGCTGGTGGC GCCGCATGCG CCTGTCCCTC
ACAGCCCACC TCCCCGGCAC CACCCGCCCC CGCACCCGCG GCACCCGCCT GGGCGGCTCC
CGCCTCGGCG AAGCCCGCGG CGGCCCAGAC AGCGACGCGG CGGGTTCGGA TACCGCCTGG
GTGCCGCGAT ATCCCGAGGC GCGCGTGGGA TGCGCGGCTG CCGGTTGA
 
Protein sequence
MGVVMSVQPE SPRKSVSLST TVTRAPAPRP ADSRGTGGTE FPYTPESVGT ARHALADALQ 
RMRVAPPAAD DAVLILSELV SNALRHALPL AGGTIRVAWW MADDKVLRIA VTDGGRQQPG
QAPPLKAAEA PDLVAPDLDD IDESAVDGRG LGIVGLLADA WGVEPWYAPE TEATSPYLHA
ATTSATASAA SSAATSRAIH PDPSAPKTVW AAVRLHARHA APPPPDDQDR RWWRRMRLSL
TAHLPGTTRP RTRGTRLGGS RLGEARGGPD SDAAGSDTAW VPRYPEARVG CAAAG