Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0238 |
Symbol | |
ID | 8331565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 266366 |
End bp | 267253 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644953405 |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_003111032 |
Protein GI | 256389468 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.112494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGTCG TCATGTCGGT GCAACCGGAG AGTCCCCGGA AATCAGTGAG TTTGTCCACG ACGGTCACAC GCGCCCCGGC GCCACGGCCC GCGGACAGCA GAGGCACGGG CGGGACCGAG TTCCCGTACA CACCCGAAAG CGTCGGCACG GCCCGCCACG CGCTGGCCGA CGCACTCCAG CGCATGCGCG TGGCACCCCC AGCCGCGGAC GACGCGGTCC TGATCCTCTC GGAACTGGTG AGCAACGCCC TCCGGCACGC CCTACCGCTG GCCGGCGGCA CCATCCGAGT CGCCTGGTGG ATGGCCGACG ACAAGGTCCT GCGCATAGCC GTGACCGACG GCGGCCGCCA ACAACCGGGC CAAGCACCAC CACTCAAAGC CGCAGAAGCC CCCGACCTGG TGGCACCCGA CCTCGACGAC ATCGACGAAT CCGCCGTGGA CGGCCGCGGA CTCGGCATCG TGGGCCTCCT GGCCGACGCC TGGGGCGTCG AACCCTGGTA CGCCCCCGAA ACAGAAGCAA CGAGCCCCTA TCTACACGCC GCCACCACAT CAGCGACGGC ATCAGCGGCA TCATCGGCGG CGACATCCCG CGCTATTCAC CCGGACCCCA GCGCCCCCAA AACAGTCTGG GCAGCAGTCC GCCTCCACGC CCGCCACGCA GCGCCCCCAC CCCCCGACGA CCAAGACCGC CGCTGGTGGC GCCGCATGCG CCTGTCCCTC ACAGCCCACC TCCCCGGCAC CACCCGCCCC CGCACCCGCG GCACCCGCCT GGGCGGCTCC CGCCTCGGCG AAGCCCGCGG CGGCCCAGAC AGCGACGCGG CGGGTTCGGA TACCGCCTGG GTGCCGCGAT ATCCCGAGGC GCGCGTGGGA TGCGCGGCTG CCGGTTGA
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Protein sequence | MGVVMSVQPE SPRKSVSLST TVTRAPAPRP ADSRGTGGTE FPYTPESVGT ARHALADALQ RMRVAPPAAD DAVLILSELV SNALRHALPL AGGTIRVAWW MADDKVLRIA VTDGGRQQPG QAPPLKAAEA PDLVAPDLDD IDESAVDGRG LGIVGLLADA WGVEPWYAPE TEATSPYLHA ATTSATASAA SSAATSRAIH PDPSAPKTVW AAVRLHARHA APPPPDDQDR RWWRRMRLSL TAHLPGTTRP RTRGTRLGGS RLGEARGGPD SDAAGSDTAW VPRYPEARVG CAAAG
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