Gene Caci_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0215 
Symbol 
ID8331541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp232341 
End bp233099 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID644953383 
Productbeta-lactamase domain protein 
Protein accessionYP_003111011 
Protein GI256389447 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAG CCTTCCGTCC GGACGACGTC GTGCGCGTCG ACGGCGACGT GCACGCGGTG 
CTCGGCAGTG ATGTGACGTG GGTCGTGGTG AAGGACGGCG ATGCCGCGAC GCTGATCGAC
ACCGGTTATC CGCAGGACTA CGACAACCTT CTGGCGTCGT TGGCGCTGCT CGGCGTGGCG
CCGGAGTCGT TGAGCGCGAT TCTGATCACG CACGCGCACA ACGATCACAT CGGTGGCGCC
GAGCGGCTGC GGTCAACGTA TGGGATTCCG GTCCTGACGC ACGCCGAGGA GGTGCCGCAC
GCGCGGCGGG ATTTCCTGGA CCAGGTGTCG ATCGGGAAGG TGGCGGCGAA CGCCTGGCGT
CCGGGGGTCG TGCCGTGGGC ACTGCGGGCG CTGCGCAGCG GTGGCACGGC GGACGTGCCG
GTGGCCGAGC CGCAGGCCTT TCCCGCCGAC GGGCCGCTCG ACCTGCCCGG GGCGCCGATC
CCGCTGCACA CTCCCGGGCA CACCGAAGGG CACTGCGCGT ATCTGTTGCC GGCTGCCGGG
ATCCTGGTCT GCGGGGACGC GCTGGGCACC GGGCATCCGA CATCGCGGAT CAGCGGACCG
CAGATGCTGC CGACCATGTT CCAGAAGGAT CGGGCGCGCG CGCTGGCCAG CCTCAGCGTT
TTTGAGGGGA TCGACGCGGA CGTGCTGGTC CCCGGGCACG GTCCGGTACA CCGCGGCGCG
ATGCGGGACG TCGTCCAGCG AGTGCGGGAG CGCGGGTAG
 
Protein sequence
MVKAFRPDDV VRVDGDVHAV LGSDVTWVVV KDGDAATLID TGYPQDYDNL LASLALLGVA 
PESLSAILIT HAHNDHIGGA ERLRSTYGIP VLTHAEEVPH ARRDFLDQVS IGKVAANAWR
PGVVPWALRA LRSGGTADVP VAEPQAFPAD GPLDLPGAPI PLHTPGHTEG HCAYLLPAAG
ILVCGDALGT GHPTSRISGP QMLPTMFQKD RARALASLSV FEGIDADVLV PGHGPVHRGA
MRDVVQRVRE RG