Gene Caci_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0206 
Symbol 
ID8331532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp222455 
End bp224104 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content71% 
IMG OID644953374 
Productacyl-CoA synthetase 
Protein accessionYP_003111002 
Protein GI256389438 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGG TCGCGGAGTT GATCGGTGTC CAGTCCCAGC ACACGGGTCC CGGGCTGCTC 
GGCCCGAACG GCCTGCGGTA TCAGCACCCG GAGATCGCCG CGCACGCCGC CAGCAGGGCC
GCACTGTTCG GCGAGCGGCA TCGTCCGGGC ATGCGGCCGC ATATCGGAGT CCTGCTGGGC
AACACCGACG AGTTCGTGTT CTGGCTCTCC GCCGCGGCGC TCGCCGGGGC GGCGCTGGTC
GGCGTGAACC CCACGCGCCG TGGCGCCGAG CTGGCGCGGG ACATCCGGCA CGCGGAATGC
GAGCTGCTGG TGACCGACCG CGAGCATCTG CCGCTGCTCG CCGATCTGGG TCTGGACGCG
CTGCCGCTGC TGATCGTGGA CGATCCGGCG TACCGCGAGG CTCTGCAACC CTTCGCCGGC
GTCAGCGCGA CAGACGTCAA GCCGATCGCC CCGATCACCG AGGACACCCG GCTGCTGCTG
TACTTCACCT CAGGCTCGAC CGGCGCACCG AAGGCGGTGA CGTGCGTCCA AGGGCGCGTC
GCGGCGTCCG GCGCCGTAAT GGCCGAACGC TTCGGGCTGA TCGCCTCCGA CGTCTGCTAC
ATCCCGATGC CGATGTTCCA CGGCAACGCG ATCCTGGCGA ACTGGGGACC GGCTCTGGTC
GCCGGAGCCA CCGTCGCCCT GCGCGACCGC TTCTCGGCCT CCGGCTTCCT CTCCGACGTC
CGCGAGTATC AGGCCACGTA CTTCACCTAC GTCGGCCGCG CGATCTCCTA CATCCTGGCC
ACCCCCGAGC ACCCCGAGGA CGCCGCAAAC CCGCTGCGCG CCGGCTTCGG CACCGAGGCC
GGGCCACGGG ACCGGGAACG CTTCGAGCAG CGCTTCGGCT GCCACCTCTC CGAGGGCTAC
GGCGCCTCCG AAGGCGGCAT CAACATCGTC GCGCCCCGCA CCTTCCCGCC CTCGGTCCTG
GCACGCGGCG CAGTGGTCGG CAAAACCAAC CCGACCCTGT CGATCCTGAA CCTCGAAACC
GGCGCGCCCT GCCCGCCCGC CGAATTCGAC GCCGCCGGCC GCCTCCTGAA CGGCGCCGAG
GCGATCGGCG AACTCGTCGG CACCGGACCC GGCGGCTTCA CCGGCTACTG GAACAACCCC
GCCGCCGACG CCGAACGCTT CGCCGACGGC CGCTACCGCA GCGGCGACCT GTTCTACGCC
GACACCGACG GCTGGCTCTA CTTCGCTGCC CGCAAGGCCG ACCGCATGCG CGTGGACGGC
GAGAACATCT CCGTGGCGCT CCTGGAGGCG ATCCTCGCCC GCTGGGAGCC GGTCGAGGCG
GTCGCCGCCT ACGCCGTACC GGACGAGGTC ACCGGCGACG CGGTGATGTG CGCCCTGGTC
CTGAGGCAGG GCTCTGATTT CGACCCCGGG GCGTTCGCGG ATTTCCTTGC CGCACAAGCG
GATCTGGGCA CCAAGATGGC GCCGCGCTTC GTCCGCGTCA CCGCCGCCCT GGCCACCACA
GCCACCGAGA AGGTGTCGCG CTACGCGATG CGGGAGCAGG GGTGGTGGGA CGTAGGGGAG
GACGCCGTGT GGGCTCGTAC GGGCCGCCAG GGGGCTTATC AGCCCCGCGA CACAGGCAGT
GTCAACCGGA ACTCCGCGCC GCCGCCCTGA
 
Protein sequence
MPTVAELIGV QSQHTGPGLL GPNGLRYQHP EIAAHAASRA ALFGERHRPG MRPHIGVLLG 
NTDEFVFWLS AAALAGAALV GVNPTRRGAE LARDIRHAEC ELLVTDREHL PLLADLGLDA
LPLLIVDDPA YREALQPFAG VSATDVKPIA PITEDTRLLL YFTSGSTGAP KAVTCVQGRV
AASGAVMAER FGLIASDVCY IPMPMFHGNA ILANWGPALV AGATVALRDR FSASGFLSDV
REYQATYFTY VGRAISYILA TPEHPEDAAN PLRAGFGTEA GPRDRERFEQ RFGCHLSEGY
GASEGGINIV APRTFPPSVL ARGAVVGKTN PTLSILNLET GAPCPPAEFD AAGRLLNGAE
AIGELVGTGP GGFTGYWNNP AADAERFADG RYRSGDLFYA DTDGWLYFAA RKADRMRVDG
ENISVALLEA ILARWEPVEA VAAYAVPDEV TGDAVMCALV LRQGSDFDPG AFADFLAAQA
DLGTKMAPRF VRVTAALATT ATEKVSRYAM REQGWWDVGE DAVWARTGRQ GAYQPRDTGS
VNRNSAPPP