Gene Caci_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0172 
Symbol 
ID8331498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp184839 
End bp185807 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID644953340 
ProductABC transporter related 
Protein accessionYP_003110968 
Protein GI256389404 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA TCGAGGTGCG CGGCCTGCGG AAGGCCTACG GCGACGTAAC CGCCGTGGAG 
GACGTCTCGT TCGAGGTCGC CGAAGGGGAG ATCTTCGGGA TCCTCGGGCC CAACGGCGCC
GGGAAGACCA CGACCGTGGA GTGTGTCAGC GGTCTGCGGA CGCCCGACGC CGGCGAGGTC
CGCGTGCTGG GTCTGGACCC GCGGCGCGAT CGTGAGGACG TCCGCCAGGT GCTCGGCGTG
CAGCTGCAGG AGAGCCAGCT GCCGGGCAAG ATCCATGTGC GCGAGGCGCT GGAGCTGTAC
GCGTCCTTTT ACCGGGACCC GGCCGACGTG GACCGGCTGC TGGCGCAGTG GGAGCTGACG
GAGAAGGCCG GCGCCCGCTT CGGCAAGCTG TCCGGCGGCC AGAAGCAGCG GCTGGCCGTG
GCGCTGGCGA TGGTCGGCAA GCCGCGGGTG GTCGTGCTGG ACGAGCTGAC CACCGGTCTG
GACCCGCACG CGCGGCGCAC CGCCTGGGAG ATGGTCCAGG CCGTCCGGGA CTCCGGCGTC
ACCGTCCTGC TGGTCACGCA CTTCATGGAA GAGGCCGAGC GGCTCTGCGA CCGGGTCGCG
ATCATCGACG CCGGCCGCGT GGTCGCCCTG GACACCCCGG CCGCGATGGC CGCGCGGGGT
CCGGCAGCCG GCCAGCGGAT GCGGTTCCGG CCCTCGGCGC CGGTCGAGGA CGCGGACCTG
CTCGCGTTGC CCGAGGTCCG CAGCGTCGAG CGGCACGGCG CGCATCTGGA AGTGAGCGGG
ACCTCGGAAG TCATCGGGGC GGTCACCGCG TACCTCGCGC GGCGCCAGAT CATCGCCGCC
GAGCTGCGCG TCGAGCAGAG CAGCCTCGAC GACGCGTTCA TCGCGTTGAC GACGCACGCG
ACCACCACGA CCCATGCCGC GCAGACCATG CAGACGGCGC AGACCGCGCA GACCGCCAAG
GAGTCCTGA
 
Protein sequence
MPAIEVRGLR KAYGDVTAVE DVSFEVAEGE IFGILGPNGA GKTTTVECVS GLRTPDAGEV 
RVLGLDPRRD REDVRQVLGV QLQESQLPGK IHVREALELY ASFYRDPADV DRLLAQWELT
EKAGARFGKL SGGQKQRLAV ALAMVGKPRV VVLDELTTGL DPHARRTAWE MVQAVRDSGV
TVLLVTHFME EAERLCDRVA IIDAGRVVAL DTPAAMAARG PAAGQRMRFR PSAPVEDADL
LALPEVRSVE RHGAHLEVSG TSEVIGAVTA YLARRQIIAA ELRVEQSSLD DAFIALTTHA
TTTTHAAQTM QTAQTAQTAK ES