Gene Caci_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0163 
Symbol 
ID8331488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp173877 
End bp175469 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content71% 
IMG OID644953330 
Productcarboxyl transferase 
Protein accessionYP_003110959 
Protein GI256389395 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000870722 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGC TCCGCTCCCA GCTGGATCCG ACGTCGGAGG CGGCGCGTGC CGATCGTGAG 
GCGGTGCTCG GGGCGCTGGA GCGGATCAGG GAACTGCAGC AGAAGGTGCT GGCCGGCGGG
GGTGAGAAGT ACGCCGAGCG GCATCGGTCG CGGGGCAAGC TGCTGGCGCG GGAGCGGTTG
GATCTGCTGC TCGACGAGGA TTCGCCGTTC CTGGAGCTGG CGGCGCTGGC CGGGACGCAC
GATCCGGCCG AGACCGTCGG CGGCGTGTCC GGCATCGGGA CGGTGTCCGG TGTCGAGTGC
ATGATCGGCG CCAACGACCC GACGGTGAAG GGCGGCGCGG TCGGGCCCTC GGGGGTGGCC
AAGCAGCTGC GGATGCTGGA GATCGCCGAG CGGAACCGGC TGCCGCTGAT CTCGCTGACC
GAGTCGGCCG GCGCCGATCT GCCGCGGCAG GCGGACATCT TCGTGCCCGG CGGCGCGTCG
TTCAAGGGGA TCTCGCGGTT GTCGGCGGCG GGCATCCCGA CGCTGTCGAT CGTGTTCGGC
TCCTCGACGG CCGGCGGCGC CTACGTGCCC GGCATGAGCG AGTTCACCGT GATGGTGAAG
AACCAGGCGG CCGTCTACCT CGGTGGTCCG CCGCTGGTGA AGATGGCGAT CAACGAGGAC
ACCGACGACG AGACGCTCGG CGGCGCGGAC ATGCACGCGC GGGTGTCCGG TCTCGCCGAC
TACCTGGCCC GCGACGAGCG CGACGCGATC CGCATCGGCC GGCAGATCAT CGCCGACCTG
CGCTGGCGCA AGCGCGGTCC GGGACCGACC GAGAGCGCCG ATGAACCGCT CTACGCCGCC
GAGGACCTGC TCTCCCTCGC GCCGATGGAC TTGCGCCGGC CGGTCGAGGT GCGGGAGATC
CTGGCGCGGG TGCTGGACGG CTCGCGCTTC TCGGAGTTCA AGCCGCTGTA CGGCACCACC
CTGGTCTGCG GCTGGGGTTC GATCCACGGC TACCCGGTCG GCATCCTGGC CAACAACGGC
ATCCTGTTCT CCGAGGAGGC CAACAAGGGC GCGCACTTCG TCCAGCTGGC CAACGCCCGC
GAGGTCCCGC TGCTGTTCGT GCAGAACATC ACCGGCTTCA TGGTCGGCTC GCGCTATGAG
CGCGGCGGCA TCATCAAGGA CGGCAGCAAG CTGATCAACG CGGTCTCCAA CTCCGCGGTG
CCGCATGTGA CGCTGATGGT CGGCGCCTCC TACGGCGCCG GCAACTACGG CATGTCCGGC
CGCGCCTACG ATCCCCGCTT CGTGTTCACC TGGCCGAACC ACCGGATCGC CGTGATGGGC
GGCCGGGAGC TGGCCGGGGT GATGTCGATC GTGCAGCGGC AGAAGGCTGA GAAGGCCGGG
CAGCCGTACG ACGAGGCCGC CGACGCCCAG ACCCGGGAGT TCGTCGAGGC GATGGTCGAC
GGGCAGTCCG ACGCCGTCTA CGCCAGCGGC CGGCTGTGGG ACGACGGGGT CATCGACCCG
CGCCAGAGCC GCACCGTGCT GGGGCTCGCT TTGTCCGCGA TCGATTCCGG GCCGGTGGTG
GGGACGCGCG CGTTCGCGCC GTTCCGGATG TAG
 
Protein sequence
MPVLRSQLDP TSEAARADRE AVLGALERIR ELQQKVLAGG GEKYAERHRS RGKLLARERL 
DLLLDEDSPF LELAALAGTH DPAETVGGVS GIGTVSGVEC MIGANDPTVK GGAVGPSGVA
KQLRMLEIAE RNRLPLISLT ESAGADLPRQ ADIFVPGGAS FKGISRLSAA GIPTLSIVFG
SSTAGGAYVP GMSEFTVMVK NQAAVYLGGP PLVKMAINED TDDETLGGAD MHARVSGLAD
YLARDERDAI RIGRQIIADL RWRKRGPGPT ESADEPLYAA EDLLSLAPMD LRRPVEVREI
LARVLDGSRF SEFKPLYGTT LVCGWGSIHG YPVGILANNG ILFSEEANKG AHFVQLANAR
EVPLLFVQNI TGFMVGSRYE RGGIIKDGSK LINAVSNSAV PHVTLMVGAS YGAGNYGMSG
RAYDPRFVFT WPNHRIAVMG GRELAGVMSI VQRQKAEKAG QPYDEAADAQ TREFVEAMVD
GQSDAVYASG RLWDDGVIDP RQSRTVLGLA LSAIDSGPVV GTRAFAPFRM