Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0163 |
Symbol | |
ID | 8331488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 173877 |
End bp | 175469 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953330 |
Product | carboxyl transferase |
Protein accession | YP_003110959 |
Protein GI | 256389395 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000870722 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTGC TCCGCTCCCA GCTGGATCCG ACGTCGGAGG CGGCGCGTGC CGATCGTGAG GCGGTGCTCG GGGCGCTGGA GCGGATCAGG GAACTGCAGC AGAAGGTGCT GGCCGGCGGG GGTGAGAAGT ACGCCGAGCG GCATCGGTCG CGGGGCAAGC TGCTGGCGCG GGAGCGGTTG GATCTGCTGC TCGACGAGGA TTCGCCGTTC CTGGAGCTGG CGGCGCTGGC CGGGACGCAC GATCCGGCCG AGACCGTCGG CGGCGTGTCC GGCATCGGGA CGGTGTCCGG TGTCGAGTGC ATGATCGGCG CCAACGACCC GACGGTGAAG GGCGGCGCGG TCGGGCCCTC GGGGGTGGCC AAGCAGCTGC GGATGCTGGA GATCGCCGAG CGGAACCGGC TGCCGCTGAT CTCGCTGACC GAGTCGGCCG GCGCCGATCT GCCGCGGCAG GCGGACATCT TCGTGCCCGG CGGCGCGTCG TTCAAGGGGA TCTCGCGGTT GTCGGCGGCG GGCATCCCGA CGCTGTCGAT CGTGTTCGGC TCCTCGACGG CCGGCGGCGC CTACGTGCCC GGCATGAGCG AGTTCACCGT GATGGTGAAG AACCAGGCGG CCGTCTACCT CGGTGGTCCG CCGCTGGTGA AGATGGCGAT CAACGAGGAC ACCGACGACG AGACGCTCGG CGGCGCGGAC ATGCACGCGC GGGTGTCCGG TCTCGCCGAC TACCTGGCCC GCGACGAGCG CGACGCGATC CGCATCGGCC GGCAGATCAT CGCCGACCTG CGCTGGCGCA AGCGCGGTCC GGGACCGACC GAGAGCGCCG ATGAACCGCT CTACGCCGCC GAGGACCTGC TCTCCCTCGC GCCGATGGAC TTGCGCCGGC CGGTCGAGGT GCGGGAGATC CTGGCGCGGG TGCTGGACGG CTCGCGCTTC TCGGAGTTCA AGCCGCTGTA CGGCACCACC CTGGTCTGCG GCTGGGGTTC GATCCACGGC TACCCGGTCG GCATCCTGGC CAACAACGGC ATCCTGTTCT CCGAGGAGGC CAACAAGGGC GCGCACTTCG TCCAGCTGGC CAACGCCCGC GAGGTCCCGC TGCTGTTCGT GCAGAACATC ACCGGCTTCA TGGTCGGCTC GCGCTATGAG CGCGGCGGCA TCATCAAGGA CGGCAGCAAG CTGATCAACG CGGTCTCCAA CTCCGCGGTG CCGCATGTGA CGCTGATGGT CGGCGCCTCC TACGGCGCCG GCAACTACGG CATGTCCGGC CGCGCCTACG ATCCCCGCTT CGTGTTCACC TGGCCGAACC ACCGGATCGC CGTGATGGGC GGCCGGGAGC TGGCCGGGGT GATGTCGATC GTGCAGCGGC AGAAGGCTGA GAAGGCCGGG CAGCCGTACG ACGAGGCCGC CGACGCCCAG ACCCGGGAGT TCGTCGAGGC GATGGTCGAC GGGCAGTCCG ACGCCGTCTA CGCCAGCGGC CGGCTGTGGG ACGACGGGGT CATCGACCCG CGCCAGAGCC GCACCGTGCT GGGGCTCGCT TTGTCCGCGA TCGATTCCGG GCCGGTGGTG GGGACGCGCG CGTTCGCGCC GTTCCGGATG TAG
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Protein sequence | MPVLRSQLDP TSEAARADRE AVLGALERIR ELQQKVLAGG GEKYAERHRS RGKLLARERL DLLLDEDSPF LELAALAGTH DPAETVGGVS GIGTVSGVEC MIGANDPTVK GGAVGPSGVA KQLRMLEIAE RNRLPLISLT ESAGADLPRQ ADIFVPGGAS FKGISRLSAA GIPTLSIVFG SSTAGGAYVP GMSEFTVMVK NQAAVYLGGP PLVKMAINED TDDETLGGAD MHARVSGLAD YLARDERDAI RIGRQIIADL RWRKRGPGPT ESADEPLYAA EDLLSLAPMD LRRPVEVREI LARVLDGSRF SEFKPLYGTT LVCGWGSIHG YPVGILANNG ILFSEEANKG AHFVQLANAR EVPLLFVQNI TGFMVGSRYE RGGIIKDGSK LINAVSNSAV PHVTLMVGAS YGAGNYGMSG RAYDPRFVFT WPNHRIAVMG GRELAGVMSI VQRQKAEKAG QPYDEAADAQ TREFVEAMVD GQSDAVYASG RLWDDGVIDP RQSRTVLGLA LSAIDSGPVV GTRAFAPFRM
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