Gene Caci_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0158 
Symbol 
ID8331483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp168565 
End bp169635 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID644953325 
Productputative aminotransferase 
Protein accessionYP_003110954 
Protein GI256389390 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACG ACGTCCAGAC CCCGAAGCTC CGTGAAGCAT TGCGCGGCAT CCCCGCCTAC 
AAGGCAGGAA AGAACCCCGA CGCCTCCGCC TTCAAGCTTT CCTCGAACGA GAACCCTTAC
CCGCCGCTGC CGGGTGTCCT GGAGGCGGTC CAGAAGTCCG CGGAGAACTT CAACCGCTAC
CCGGACATGG GCTGCTCGGC GCTGAGTTCG GAGATCGCCG AGCGCTTCGG CGTGCCGGTG
GAGCACGTCG CGACCGGGAC CGGCTCGGTC GGCGTGGCCC AGCAGCTGCT GCAGGCCACC
TCGGGTCCGG GGGACGAGGT GATCTACGCC TGGCGCTCCT TCGAGGCGTA CCCGATCATC
ACGCAGATCT CCGGCGCTAC CTCGGTGCGC GTCCCGCTGA CCCCCGAGGA GCACCACGAC
CTGGACGCGA TGGCCGCCGC GGTGACCGAC CGCACGCGGC TGATCTTCGT GTGCAACCCG
AACAACCCGA CCGGCGTCGC GATCTCCGAG GACGCCCTGG TGCGCTTCCT GGACCGGGTC
CCCAGCGACG TGCTGGTCGT GATCGACGAG GCGTACCGGG AGTTCGTGCG GGACGACAGC
ATCCCGGACG GCGTCGACCT CTACCGCGAC CGCCCCAACG TCGCCGTCCT GCGCACCTTC
TCCAAGGCCT ACGGCCTGGC CGGACTCCGC GTCGGGTTCG CGATCGCGCA CGAGCCGGTC
GCCGCGGCGC TGCGCCAGAC CGCCGTGCCG TTCGGGGTGA ACAGCCTGGC GCAGGTCGCC
GCGATCGAGT CGCTGCGCGC CGAGAAGCTG CTGCTGGAGC GCTGCGAGGC GCTGGTCCAG
GAGCGCACGC GGGTCACCGA GGCGCTGCGC GAGCAGGGCT GGACCGTGCC GGAGAGCCAG
GCCAACTTCA TCTGGCTGCG TCTCGGCGAG CGCACGGCCG AGTTCGCCGC GAAGGCCGAG
GCAGCCGGGA TCGTGGTGCG GCCGTTCGCC GGCGAGGGCG CGCGGATCAC CGTCGGCGAG
GTCGAGGCGA ACGACATCCT GCTGCGGGTC ACAGCCGAGT TCCAGGAGTA G
 
Protein sequence
MADDVQTPKL REALRGIPAY KAGKNPDASA FKLSSNENPY PPLPGVLEAV QKSAENFNRY 
PDMGCSALSS EIAERFGVPV EHVATGTGSV GVAQQLLQAT SGPGDEVIYA WRSFEAYPII
TQISGATSVR VPLTPEEHHD LDAMAAAVTD RTRLIFVCNP NNPTGVAISE DALVRFLDRV
PSDVLVVIDE AYREFVRDDS IPDGVDLYRD RPNVAVLRTF SKAYGLAGLR VGFAIAHEPV
AAALRQTAVP FGVNSLAQVA AIESLRAEKL LLERCEALVQ ERTRVTEALR EQGWTVPESQ
ANFIWLRLGE RTAEFAAKAE AAGIVVRPFA GEGARITVGE VEANDILLRV TAEFQE