Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0157 |
Symbol | |
ID | 8331482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 167197 |
End bp | 168402 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644953324 |
Product | putative phytochrome sensor protein |
Protein accession | YP_003110953 |
Protein GI | 256389389 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CACGCGAATC GCCCGAAATA GCCGATCTGC GCGAGGCCCT GGCCGCCTCG CGCCGCCGCG AGTCGTGGCT CTCGGCGGCT GCGGACGTCA TCACCCTGAT GTTGATCGCC GTGGACCCGC ACGAGGTCCT GACCCTGGTC GCCGAGCGCG CCCGGGAGGC CTCCGGCGCC GACCACTGCT CGCTGCTGCT GCAGCACGTG GACGGCAGCT GGCGCATCGA CGTGGCCACC GGACTGGCTG CCGACCAGGT GCGCGGAGCG TTCGTGGAAC CGCACCGGCG GTCGGTGCAG GTGGCGGTCA CCGGCCGGGC GCTCGCGCTG GAGGCCGGGG ACGTGGACCC GGAGGAACTG GCGCCGCCCT TCCGCCGGTT CGGCGCCATC GTGTACGCCG CCCTGGCGCA GCGCGATGAC CGGCCGATCG GCACGCTGGT CCTGGCCAAC GCCCCGGGCG GCCGGACCTT CGACGAGGAG GACGCCCGGC TGGCCACCGC CTTCGCGCAC CAGGCGGGCC TGGCGCTGGC GCTCACCGAG GCCCGCGCCG CCGAGGACCG GCTGGCGGTC TACGCCGACC GCGAGCGCAT CGCCCGCGAT CTGCACGACC TCACCATCCA GCGGATCTTC GCCGCCGGCC TGTCGCTGCA GACGCTGAGC CGCCGGCTGA ACTCCCCCGG CCCGGACCTG CCCGCCGCCG CCGGGCGTCT GGACGGCGTC ATCGACGAAC TCGACGCCGC GATCGCCGAG ATCCGCACCA CGATCTTCGA CCTCCAGCTC ACCGCCGACC AGGAGGCCAC CTCCACCCGC GCCCGGGTCC TGCGCGAGGC CTCGCGCGCC GCGCGCGTCC TGGGCTTCGA GCCCTCGGTC CGCTTCACCG GCCCGCTGGA CTCCCTCGTC GGCGGCGACA CCGGGGCGCA CCTGGTCGCC GCCGTCCGCG AAACCCTGGC GAACGCCGCG AAGCACGCCG GCGCGACCCG GGTCGAGGTG GTGGTGACGG TAGAGACCGG ACCGGCCACC ACCTTGACCC TCGACGTCCT CGACGACGGC GGCGCCCCGA TGCCGCGCTG GCGCCCGAAC CCGCGCACCG CCCGCCAGGG CCTGTCCAAC CTCGCCGCCC GCGCCCGGGA ACTCGGCGGC AGCTTCCACG CCGGACCCGC CGACGGCGAC CGGGGGACCA GGGTGTCGTG GCGGGTCCCG CTGTAG
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Protein sequence | MSESRESPEI ADLREALAAS RRRESWLSAA ADVITLMLIA VDPHEVLTLV AERAREASGA DHCSLLLQHV DGSWRIDVAT GLAADQVRGA FVEPHRRSVQ VAVTGRALAL EAGDVDPEEL APPFRRFGAI VYAALAQRDD RPIGTLVLAN APGGRTFDEE DARLATAFAH QAGLALALTE ARAAEDRLAV YADRERIARD LHDLTIQRIF AAGLSLQTLS RRLNSPGPDL PAAAGRLDGV IDELDAAIAE IRTTIFDLQL TADQEATSTR ARVLREASRA ARVLGFEPSV RFTGPLDSLV GGDTGAHLVA AVRETLANAA KHAGATRVEV VVTVETGPAT TLTLDVLDDG GAPMPRWRPN PRTARQGLSN LAARARELGG SFHAGPADGD RGTRVSWRVP L
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