| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0143 |
|---|
| Symbol | |
|---|
| ID | 8331468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 151637 |
|---|
| End bp | 152257 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644953310 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003110939 |
|---|
| Protein GI | 256389375 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACG CGCACCGCGC CTCGGCGCCG TCCGACGGCG ACATCAAGAT CCTGCTGGTC
GACGACCGCC CCGAGAACCT GCTGGCGCTG GAGTCCATCC TGGGCTCCCT GGGCCACGAA
CTGGTCACCG CGGCCTCCGG CGAGCAGGCC CTGCGCGCAG TCCTGCGCGA GGAGTTCGCG
GTGATCCTGC TGGACGTCCG CATGCCCGGC ATGGACGGCT TCGAGGTGGC GGCGCACATC
CGCCTGCGCG AACGCTCCCG CGACACCCCG ATCATCTTCC TCACCGCCGC CGGCGACGGC
CCGCACCAGA CCCTGCGCGG CTACGCCGCC GGCGCCGCCG ACTACCTGAC CAAGCCCTTC
GACCCCTGGG TCCTGCGCGC CAAGGTCGGC GTCTTCGCCG AGCTCCACCG CAAGAACCGC
CAGCTGAAGG AGCAGGCGGA GATGCTGCGC GAGACCGCCG GCGTCACCCC CCGGATGCTC
GACGAGCTGT CGAACCGGCT CGGCGCCATC GAGGGCACCC TGGCCCTGCT GATCGACCAG
AGCGGACGCG AGGGACCGGT CGGGCGGCTG GAGCGGCGGG TCGTGCGGAT GCGGGCGGCT
TTGGACGCGG TGCGGGTCTG A
|
|---|
| Protein sequence | MNDAHRASAP SDGDIKILLV DDRPENLLAL ESILGSLGHE LVTAASGEQA LRAVLREEFA
VILLDVRMPG MDGFEVAAHI RLRERSRDTP IIFLTAAGDG PHQTLRGYAA GAADYLTKPF
DPWVLRAKVG VFAELHRKNR QLKEQAEMLR ETAGVTPRML DELSNRLGAI EGTLALLIDQ
SGREGPVGRL ERRVVRMRAA LDAVRV
|
|---|
| |