| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0108 |
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| Symbol | |
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| ID | 8331433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 111026 |
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| End bp | 111454 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953275 |
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| Product | regulatory protein, FmdB family |
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| Protein accession | YP_003110904 |
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| Protein GI | 256389340 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0629373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.10638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGACTT ACCAGTACCA GTGCAAAGAC TGCGGTGAGG CGCTGGAGGT CGTGCAGAAG
TTCACGGACG ACGCGCTGAC CGTGTGCCCG AACTGCCAGG GCGACCTGCG CAAGGTCTTC
TCCGCCGTGG GCATCGTGTT CAAGGGCAGC GGTTTCTACC GCACCGACAG CCGGTCGTCG
TCGAGTTCGT CGACGCCGCC GGGGTCGTCC TCGAACGGCT CGTCCGGGTC GGGTTCCGGT
TCGAGTTCCG ACTCCGGCTC CGGCTCTGGC TCTGGCTCTT CGGGGTCGGG GAGTTCGAGC
GGGTCGGGCG GTTCCAGCGG CTCGGGCAGC TCAGGCGGCT CCTCCAAGGG CGGCTCGTCG
TCCTCCTCGT CGAGCACGTC GTCCTCGTCC TCGTCAAGCT CGGGCTCTTC GTCGTCCACA
AAGAGCTGA
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| Protein sequence | MPTYQYQCKD CGEALEVVQK FTDDALTVCP NCQGDLRKVF SAVGIVFKGS GFYRTDSRSS
SSSSTPPGSS SNGSSGSGSG SSSDSGSGSG SGSSGSGSSS GSGGSSGSGS SGGSSKGGSS
SSSSSTSSSS SSSSGSSSST KS
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