Gene Caci_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0086 
Symbol 
ID8331411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp89681 
End bp90544 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID644953253 
Producthypothetical protein 
Protein accessionYP_003110882 
Protein GI256389318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.202982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG CTCTGCCGAC CGTCATCGCC ACCCGGTACG TGACCGCGCT CCGCGAGGGC 
GGTTCGCTGC CCGGACTGGT CGAGGCCGCG GACCTCGGGA CGTACGTGGT GAAGTTCCGC
TCGGCCGGCC AGGGTCGCAA GGCTCTGGTC GCCGAGGTGA TCGCCGGGGA ACTGGCCCGA
GCCCTGGCTC TGCTGGTGCC AGCGCTGGTC GGCATCGAGC TGGATCCGAT CATCGGTGCC
GCCGAGCCGG ACCAGGAGAT CCAGGAACTC CTTAAGGGGA GCAAGGGACT GAACCTCGGT
ATGGACTATC TGCCGGGTTC GCTGGGATAT GACCCCTTGG CGTTTCCCGT GGAGCCCGAA
CTGGCGAGCC GCGTTGTGTG GTTCGACGCC TTGGTGCGGA ACGTGGACCG GTCGTGGCGG
AACCCGAACC TCTTGCTGTG GCATCGCAAG CTCTATCTGA TCGACCATGG AGCCTCGCTG
ATCTTCCACC ACAACTGGCC CGGCGCACAG AAGGGCGCGC TGGCTCCCTT TGACGCGAAC
GACCATGTCC TCGCCTCCTA TGCGAAGGAC ATGCCCGGCG CCGACGCCGC GCTCGCGCCG
CTCGTCACCG AGGAGTTGTT GCGGTCCGTG GTGGCGGTCG TGCCGGACGA GTGGCTGGTC
GACGAGCCCG GGTTCGACTC TGCTGACGCG GTTCGCGAGG CGTACGTCAG TTACCTGCTG
ACCCGCGTCG TCGGACCGCG CGAGTGGTTT CCACAGGTTG TGGATAGTTC CGCGCAGGAG
GCCGCACGGG CTCATGAGGG CTCGGATCTC AAGGCGCGCC TCAAGGCGAA GCACCCGAAC
TGGATGCAGG GACGGGTGAA ATGA
 
Protein sequence
MPAALPTVIA TRYVTALREG GSLPGLVEAA DLGTYVVKFR SAGQGRKALV AEVIAGELAR 
ALALLVPALV GIELDPIIGA AEPDQEIQEL LKGSKGLNLG MDYLPGSLGY DPLAFPVEPE
LASRVVWFDA LVRNVDRSWR NPNLLLWHRK LYLIDHGASL IFHHNWPGAQ KGALAPFDAN
DHVLASYAKD MPGADAALAP LVTEELLRSV VAVVPDEWLV DEPGFDSADA VREAYVSYLL
TRVVGPREWF PQVVDSSAQE AARAHEGSDL KARLKAKHPN WMQGRVK