Gene Caci_0081 details

Gene Information

• Locus tag: Caci_0081
• Symbol: dnaK
• ID: 8331406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Catenulispora acidiphila DSM 44928
• Kingdom: Bacteria
• Replicon accession: NC_013131
• Strand: +
• Start bp: 82507
• End bp: 84381
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644953248
• Product: molecular chaperone DnaK
• Protein accession: YP_003110877
• Protein GI: 256389313
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACGTC CGGTCGGCAT CGACCTCGGG ACGACGAACT CCGTCGTCTG CGTCCTGGAA 
GGTGGCGAGC CCACCGTCAT CACCAACGCC GAGGGCTCCC GGACGACGCC GTCCGTGGTC 
GCCTTCGCCA AGAACGGCGA GGTGCTGGTC GGCGAGGTCG CCAAGCGCCA GGCCGTCACC 
AACGTGGAGC GCACCATCCG GTCGGTCAAG CGCCACATGG GCACCGACTG GAAGATCGGC 
ATCGACGAGA AGAACTTCAC GCCGCAGCAG ATCTCCGCGT TCATCCTGCA GAAGCTCAAG 
CGCGACGCCG AGTCCTACCT GTCCGAGAAG GTCACCGACG CGGTCATCAC CGTCCCGGCC 
TACTTCTCCG ACTCCGAGCG CCAGGCCACC AAGGAGGCCG GCGAGATCGC GGGCCTGAAC 
GTCCTGCGCA TCGTCAACGA GCCCACCGCC GCGGCCCTGG CCTACGGCCT GGACAAGGGC 
GAGGGCGACC AGACCATCCT GGTCTTCGAC CTCGGCGGCG GCACCTTCGA CGTCTCGCTG 
CTGGAAGTCG GCAAGGACGA CGACGGCTTC TCCACCATCG AGGTGAAGGC CACCAACGGC 
GACAACCACC TCGGCGGCGA CGACTGGGAC AACGCGGTCG TGGAGTGGCT GGTCACCCAG 
TTCAAGAACG CGCACGGCGT GGACCTGTCC AAGGACAAGA TGGCCATGCA GCGTCTGCGC 
GAGGCCGGCG AGAAGGCGAA GATCGAGCTG TCCAGCTCGA CCGAGACCTC GATCAACCTG 
CCCTACATCA CCGCCTCCGC CGAGGGCCCG CTGCACCTGG ACGAGAAGCT CACGCGCTCG 
CAGTTCCAGC AGCTGACCTC GGACCTGCTG GACCGCTGCA AGACGCCGTT CCACCAGGTC 
ATCAAGGACG CCGGGGTGGC CCTGAGCGCG ATCGAGCACG TGGTGCTGGT CGGCGGCTCG 
ACCCGCATGC CGGCCGTGGC CGACCTGGTC CGGGAGCTGA CCGGCGGCAA GGAGCCCAAC 
AAGGGCGTCA ACCCCGACGA GGTCGTGGCC GTCGGCGCCG CGCTGCAGGC CGGTGTCCTC 
AAGGGCGAGG TGAAGGACGT CCTGCTGCTG GACGTCACCC CGCTGTCCCT GGGCATCGAG 
ACCAAGGGCG GCATCATGAC CAAGCTGATC GAGAAGAACA CCACGATCCC GACCAAGCGC 
TCGGAGACCT TCACCACCGC CGAGGACAAC CAGCCCTCGG TGCAGATCCA GGTCTACCAG 
GGCGAGCGCG AGATCGCGGC GTACAACAAG CGGCTGGGCA TGTTCGAGCT GACCGGCCTG 
CCGCCGGCGC CGCGCGGGCT GCCGCAGATC GAGGTCACCT TCGACATCGA CGCCAACGGC 
ATCGTGAACG TCTCGGCGAA GGACCTGGGC ACCGGCAAGG TGCAGTCGAT GGTCATCACC 
GGCGGCTCGG CGCTGCCGAA GGACGAGATC GACCGCATGA TGCGCGAGGC CGAGCAGTAC 
GCCGACGAGG ACCACAGCCG CCGCGAGGCC GCCGAGGTCC GCAACCAGGC CGAGTCGCTG 
GTCTACTCGA CCGAGAAGTT CCTCAAGGAC AACGAGGACA AGGTTCCGGC CGACGTGAAG 
TCCGAGGTCG ACGCCGCCAT CGGCGAGACC AGGGAAGCCC TCAAGAGCGA GGACTCCGCG 
ACCATCCGCT CGGCTTCGGA GAAGCTGGCG ACCACCAGCC AGAAGCTCGG CGCCGCGCTC 
TACCAGCAGG CGCAGGCCTC CGGTGAGGCG GCCGGTGCTC CGGGCGGGGA GTCCGCCGGC 
GCCCCGGGCG GCGGTGCCGA CGACGACGTG GTGGACGCCG AGATCGTCGA CGAGGGCAAG 
GGTGGCCAGG CCTGA 

 

Protein sequence

MARPVGIDLG TTNSVVCVLE GGEPTVITNA EGSRTTPSVV AFAKNGEVLV GEVAKRQAVT 
NVERTIRSVK RHMGTDWKIG IDEKNFTPQQ ISAFILQKLK RDAESYLSEK VTDAVITVPA 
YFSDSERQAT KEAGEIAGLN VLRIVNEPTA AALAYGLDKG EGDQTILVFD LGGGTFDVSL 
LEVGKDDDGF STIEVKATNG DNHLGGDDWD NAVVEWLVTQ FKNAHGVDLS KDKMAMQRLR 
EAGEKAKIEL SSSTETSINL PYITASAEGP LHLDEKLTRS QFQQLTSDLL DRCKTPFHQV 
IKDAGVALSA IEHVVLVGGS TRMPAVADLV RELTGGKEPN KGVNPDEVVA VGAALQAGVL 
KGEVKDVLLL DVTPLSLGIE TKGGIMTKLI EKNTTIPTKR SETFTTAEDN QPSVQIQVYQ 
GEREIAAYNK RLGMFELTGL PPAPRGLPQI EVTFDIDANG IVNVSAKDLG TGKVQSMVIT 
GGSALPKDEI DRMMREAEQY ADEDHSRREA AEVRNQAESL VYSTEKFLKD NEDKVPADVK 
SEVDAAIGET REALKSEDSA TIRSASEKLA TTSQKLGAAL YQQAQASGEA AGAPGGESAG 
APGGGADDDV VDAEIVDEGK GGQA