Gene Caci_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0080 
Symbol 
ID8331405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp81501 
End bp82199 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID644953247 
Producthypothetical protein 
Protein accessionYP_003110876 
Protein GI256389312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAACC TGCTCGGCAG CCTGCTCGCG ATCATCGGCG CGGCGGCCAC CCTCGTCAGT 
CCCTGGCAGG CCTGGTACAA CAACCGGCAC GGCAGCAGCT ACAAGTTCTA CGAGGTCTTC
GGATCCGGCG TGACGCTTTC CGGGTCCGGG ATCATGGACT CGGTCTTCCT GGTCTTCCTC
ATCACGGCGG TGCTGGCGGT AGCCGGGGTC GTGCTGCGCT CGCGGGCCCT GGTGGGTGCC
GCCGGCGTGA TCGCGTTCGG CTTCACCATC CTGTGGATGG TGCGCCAGGG ACAGGCCGCC
GGCGAGCTGA CCGTCACCGG CGCCAACAAC CGCGGGCTGG GCTCCGGCGT GGCCTACGCG
TTCGGCGGCG GACTGTTGAT GATCATCGGC TCGCTGATGA TGACCGGCCG CACGAGGCGG
ACCGTGGTGG CTGAGCCGGC AAGGACGAAG ACAGCGGACC AAGCCATGTA CGGCACGGCC
GCGACGACGT CGGCGCCGCC GGCGATCACG ACGACCGCCC CGGCGGACAA GAACCCGGTG
CCGCCGGCTG CGGCTCCGGC TGCGACGCCC GCTCAGACGT CGGCCTCCGC GGCGCCCACA
GCGTCCGAAC GCACCGGCAC GGAGCGGCTC AGCAAGGAGG AGCGCCAGAT GCTCGGCCTG
GACGAGGACG CCTCCGCGGA GCCCAAGAAG CAGAACTAG
 
Protein sequence
MRNLLGSLLA IIGAAATLVS PWQAWYNNRH GSSYKFYEVF GSGVTLSGSG IMDSVFLVFL 
ITAVLAVAGV VLRSRALVGA AGVIAFGFTI LWMVRQGQAA GELTVTGANN RGLGSGVAYA
FGGGLLMIIG SLMMTGRTRR TVVAEPARTK TADQAMYGTA ATTSAPPAIT TTAPADKNPV
PPAAAPAATP AQTSASAAPT ASERTGTERL SKEERQMLGL DEDASAEPKK QN