Gene Caci_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0075 
Symbol 
ID8331400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp76491 
End bp77075 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID644953242 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003110871 
Protein GI256389307 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCC CCCACACCGG AAGACGCCGC AACGAGGCGG CCCGTGAGGC GATCATCGAC 
GCCGCGATCG GTCTGCTGCA GGAGGTCGGC TACGAGGGCT TCACGATCGA GCGCCTGGCC
CGCGACGCGG GAGTCGGCAA GCAGACCGTC TACCGCTGGT GGCCCTCGAA GGCCGCGGTC
ATCGCCGAGG CGGTGGGGAC GCGCGCGCAG CACACCATCC CGCTGCCCGA CACCGGTACG
CTGGCGGCCG ATTTGCGGGA GTTCTTCGAG ACCACCTTCC GGCAGTCCGA GGACCCGAAG
GTGATCAGTG AGCTGAAAAG CATGATGGTC GCCTCGATCG AGAATCCCGA GTCGGCGCGC
CCCTTCCACG ACTTCCTGGC CAGCCGCCGC GCGACCCTGC GGGTCCTGCT GGAACGCGGG
TCGGCCCGCG CCGAGGTCGC CGCCGACGCG GATCTCGACT TCCTCACGGA TCTGGCCTAC
GGCCTGCTCT GGTATCGCGG TCTGGTCGGC CATCGGCCAC TTGACGACGA CGCGGCGCGC
AAACTCGCCG GCGCACTTGT GGCAGCCGCT GCGGAATCGC AGTAA
 
Protein sequence
MERPHTGRRR NEAAREAIID AAIGLLQEVG YEGFTIERLA RDAGVGKQTV YRWWPSKAAV 
IAEAVGTRAQ HTIPLPDTGT LAADLREFFE TTFRQSEDPK VISELKSMMV ASIENPESAR
PFHDFLASRR ATLRVLLERG SARAEVAADA DLDFLTDLAY GLLWYRGLVG HRPLDDDAAR
KLAGALVAAA AESQ