Gene Caci_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0069 
Symbol 
ID8331394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp70820 
End bp72022 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content68% 
IMG OID644953236 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003110865 
Protein GI256389301 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0746502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCCA ACCCCGCCAC CGTCGGCATC GTGGCCGCTT TGGTCGCCCC GGCGGTCGCG 
GTGTCCCGCG CGGTCCAGCG GCACCGCCTC GCCGGTACGT CGGCCGAGCG CGCCGCCTAT
GCCGCGATGC ACGCCGTCGC CCTCGCCGGG CCTCCGCTGC GCGGCGGCCT GACGCCGGAC
GCCACTCGCC GCGCCGCACG CCATCTGCGG CCGTTGCTCG GCACTGCGGC GCTGGCGTTC
AACGACACCG AGCGAACCCT CACCTGGGAC GGCGCCGGAC AGCATCGGCA TTCTCAGGAC
TCCTATGAGC TCTCCACCAC TGCGCTCAAG TCCGGAAGCG TGTCCGTACT CGGTCCGGAA
GAAGTGCACT GCGGCAGCGA CTCCTGCATG ATCCGTCACG CGGTCGTGGC TCCGATCATC
CCGCCCAGCA GCATCGGAGG AATCCGCGCG GACGGTGGCA GTACGGCCAT CGGGACGCTG
TCCGTGTACA GCTCCAGCAC CTCCGTGGCC CTCGTACGGG CCGTCGGCGA AGTCGCGTAC
TGGGTCGCCA CGCAGATAGA ACTCGCGGAA CTCGACCGCT CACGGACCCT CCTCATGGAG
ACCGAGCTCA GAGCACTGCG CGCGCAGATC TCTCCGCACT TCATCTACAA CTCGCTCACC
GCCATCGCCT CCTTTACGCG CACAGACCCG CAGCGCGCCA GGGAACTCCT CCTGGAGTTT
GCGGACTTCA CCCGCTACTC GTTCCGCGCA CACGGCGAAT TCACGACGCT CGCCGAGGAG
CTGCGCTGTG TGGACCGCTA CCTGTTGCTG GAACGAGCGC GCTTCGGCGA ACGCCTCCAG
GTGGCACTGC GCATCGCTCC TGAGGTGCTC CCGGTAGAGG TTCCCTTCCT ATGCGTTCAG
CCCATAGTGG AGAACGCAGT ACGGCACGGC TTGGAAGGCA AGCCCGGTCC CGGACACGTC
ACCATCACCG CCGAACCGAC GCGCCACGAC TACCGCATCA CCGTCGCGGA CGACGGCGTC
GGGATCACCC CGGACATCCT GCGCGACGCC CTCGCACCCG CGGAGCCCGG CACGCGGACC
TCGGTCGGAC TGTCCAACGT CCACGAAAGG CTCCGCGCGG TCTACGGAAC CGCATACGGC
TTGGCGATCG AATCAGAACC CGGAGCGGGT ACCACAGTGG TGATCCGGGT CCCCAAGAAG
TAG
 
Protein sequence
MASNPATVGI VAALVAPAVA VSRAVQRHRL AGTSAERAAY AAMHAVALAG PPLRGGLTPD 
ATRRAARHLR PLLGTAALAF NDTERTLTWD GAGQHRHSQD SYELSTTALK SGSVSVLGPE
EVHCGSDSCM IRHAVVAPII PPSSIGGIRA DGGSTAIGTL SVYSSSTSVA LVRAVGEVAY
WVATQIELAE LDRSRTLLME TELRALRAQI SPHFIYNSLT AIASFTRTDP QRARELLLEF
ADFTRYSFRA HGEFTTLAEE LRCVDRYLLL ERARFGERLQ VALRIAPEVL PVEVPFLCVQ
PIVENAVRHG LEGKPGPGHV TITAEPTRHD YRITVADDGV GITPDILRDA LAPAEPGTRT
SVGLSNVHER LRAVYGTAYG LAIESEPGAG TTVVIRVPKK