Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0069 |
Symbol | |
ID | 8331394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 70820 |
End bp | 72022 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953236 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003110865 |
Protein GI | 256389301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0746502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATCCA ACCCCGCCAC CGTCGGCATC GTGGCCGCTT TGGTCGCCCC GGCGGTCGCG GTGTCCCGCG CGGTCCAGCG GCACCGCCTC GCCGGTACGT CGGCCGAGCG CGCCGCCTAT GCCGCGATGC ACGCCGTCGC CCTCGCCGGG CCTCCGCTGC GCGGCGGCCT GACGCCGGAC GCCACTCGCC GCGCCGCACG CCATCTGCGG CCGTTGCTCG GCACTGCGGC GCTGGCGTTC AACGACACCG AGCGAACCCT CACCTGGGAC GGCGCCGGAC AGCATCGGCA TTCTCAGGAC TCCTATGAGC TCTCCACCAC TGCGCTCAAG TCCGGAAGCG TGTCCGTACT CGGTCCGGAA GAAGTGCACT GCGGCAGCGA CTCCTGCATG ATCCGTCACG CGGTCGTGGC TCCGATCATC CCGCCCAGCA GCATCGGAGG AATCCGCGCG GACGGTGGCA GTACGGCCAT CGGGACGCTG TCCGTGTACA GCTCCAGCAC CTCCGTGGCC CTCGTACGGG CCGTCGGCGA AGTCGCGTAC TGGGTCGCCA CGCAGATAGA ACTCGCGGAA CTCGACCGCT CACGGACCCT CCTCATGGAG ACCGAGCTCA GAGCACTGCG CGCGCAGATC TCTCCGCACT TCATCTACAA CTCGCTCACC GCCATCGCCT CCTTTACGCG CACAGACCCG CAGCGCGCCA GGGAACTCCT CCTGGAGTTT GCGGACTTCA CCCGCTACTC GTTCCGCGCA CACGGCGAAT TCACGACGCT CGCCGAGGAG CTGCGCTGTG TGGACCGCTA CCTGTTGCTG GAACGAGCGC GCTTCGGCGA ACGCCTCCAG GTGGCACTGC GCATCGCTCC TGAGGTGCTC CCGGTAGAGG TTCCCTTCCT ATGCGTTCAG CCCATAGTGG AGAACGCAGT ACGGCACGGC TTGGAAGGCA AGCCCGGTCC CGGACACGTC ACCATCACCG CCGAACCGAC GCGCCACGAC TACCGCATCA CCGTCGCGGA CGACGGCGTC GGGATCACCC CGGACATCCT GCGCGACGCC CTCGCACCCG CGGAGCCCGG CACGCGGACC TCGGTCGGAC TGTCCAACGT CCACGAAAGG CTCCGCGCGG TCTACGGAAC CGCATACGGC TTGGCGATCG AATCAGAACC CGGAGCGGGT ACCACAGTGG TGATCCGGGT CCCCAAGAAG TAG
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Protein sequence | MASNPATVGI VAALVAPAVA VSRAVQRHRL AGTSAERAAY AAMHAVALAG PPLRGGLTPD ATRRAARHLR PLLGTAALAF NDTERTLTWD GAGQHRHSQD SYELSTTALK SGSVSVLGPE EVHCGSDSCM IRHAVVAPII PPSSIGGIRA DGGSTAIGTL SVYSSSTSVA LVRAVGEVAY WVATQIELAE LDRSRTLLME TELRALRAQI SPHFIYNSLT AIASFTRTDP QRARELLLEF ADFTRYSFRA HGEFTTLAEE LRCVDRYLLL ERARFGERLQ VALRIAPEVL PVEVPFLCVQ PIVENAVRHG LEGKPGPGHV TITAEPTRHD YRITVADDGV GITPDILRDA LAPAEPGTRT SVGLSNVHER LRAVYGTAYG LAIESEPGAG TTVVIRVPKK
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