| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0060 |
|---|
| Symbol | |
|---|
| ID | 8331385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 61413 |
|---|
| End bp | 61823 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644953227 |
|---|
| Product | protein of unknown function DUF35 |
|---|
| Protein accession | YP_003110856 |
|---|
| Protein GI | 256389292 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCC CGCTTCCGGT CACCGGCCGC GACAACGCCT ACTACTGGGA GGGCGTCGCG
AAGGGCGACG TGCTCATCCA GAAGTGCACA GCCTGTGGAT CGCTTCGGCA TCCTCCCTCT
CCCATGTGTC CGGACTGCCA ATCCCTCGAC TGGACGACGG TGAAGGCGAC CGGTCACGCC
GTCCTGCACA GCTACACGAT CTGCCATCAC CCGCTGCCGC CCTGGGAAGA GGGTCCCTAC
GCGGTCGTCC TCATCGACCT GGATATGGAA GACAGCGACG CACGGCCGCG CATTGTCTGT
GGGACTCGCG GTATCGCCAA CGAGGACCTG CGTATAGAGA TGCCACTGAG TCTCGTCTTC
GAGGATGGAC TCGTTTTCGC CGGACCCGCT CAAGAAGGTG GGGCGCCGTG A
|
|---|
| Protein sequence | MTRPLPVTGR DNAYYWEGVA KGDVLIQKCT ACGSLRHPPS PMCPDCQSLD WTTVKATGHA
VLHSYTICHH PLPPWEEGPY AVVLIDLDME DSDARPRIVC GTRGIANEDL RIEMPLSLVF
EDGLVFAGPA QEGGAP
|
|---|
| |