| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0053 |
|---|
| Symbol | |
|---|
| ID | 8331378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 52767 |
|---|
| End bp | 54476 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644953220 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003110849 |
|---|
| Protein GI | 256389285 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0455] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.544146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGACC TCACGCAGCA TCCCGTCCCC GGTCGGCCGG GCCGCCCCCG CAGGCCGGAC
CCCGCTCCGC CGCCGGGCCG CGGACCGGCG CCGGCCGCCG CCCCGCTGGC CGTGACCGCC
GATCCGGCGC TGGCCGACGC GCTGCTGCGG GTCGCCGCCG AGGCCGGGGT GCGGATCGAG
ATCGTGCCCG GTCCCAGCGC CGCGCGCCAT CGCTGGTCGG CCGCGCCGCT GGTGCTGATC
GGCGTGGACC AGACCGGCGA GGTGGCGCGC GCCGGACTGC CGCACCGGCC CGACGTGGCG
CTGATCGGCC GCGACCTGGA CGACGCCTCG GTCTGGCAGC GCGGGAGCGC CGTGGGCGCC
GCGCACGTGC TGATCCTGCC CGACTGCGAA CGCTGGCTGG CCGGCATGCT CGCCGAGGCC
GACAGCCCGC GCGAGGAGCC CGGAGCGGTG GTCGCGGTCC TGTCCGGGCG CGGCGGCGCC
GGCGGCTCGA CCCTGGCCGC CGCGCTGGCC CTGGCCGGGG TGCGCCGCGG CCTGCGCAGC
ACCCTGGTGG ATCTGGACCC CGCCGGCGGC GGCATCGACC TGCTCTTCGG GTTGGAGACC
GAGCCGGGAC CGCGCTGGTC GGAGCTGGCG CAGTGGCGCG ACGGGCGGCT GTCCGGCCGC
TCGCTGCGGG ACGCGCTGCC GACTTACGCC GCGCACTCCC GGCACGGCCT GGCCGCCGGC
CTCGGCCTGG CCGAAGAGGG TGCGGACCGG CTCCCGGTCC TGGCCTGGCC ACGGGCCCGG
CCCGGCGAGG ACGACGGACC CGGTTGGCTC GGCGCCCGGC CCACGGTCGC TGAGGACCCC
TGGTACGACA GCGGCGCGCC GGCCGATCCG GGAAAGGCGG ACCCGTGGCT CCCCCAGGAC
TCCGCACCCT CCGGCGGCGA CATTGCCGCC GGATCCGCGA ATCCCTTGTA CGGCGCGGGA
TCTCCGGACA TCGCCGAGGA TCTGTGGTCT GGCGGCGGTT CGTCGCGACG GCAGGAAACC
GTCGGACCGC GGACCGGCGG AGGCCGGTTC AATGCTGACG GCTCATCAGC GGAATCACTT
TCCCGGACCC GCCTGATCGC GCTGGAAAAC TCTGATTCAG AGGTATCGAC GGAAGTCGAC
GACGGCTCCC GGGATCGCGA CCGGGTCGCC GACGCGGCGC GGGCGACAGC CCGGCCGCAG
CACGGTCTGC CGATTCTCAC CTACCCGCAC ACCCGCGCCG ACCTACCGCT GCCGGCGGTC
GCCGCCGAGC CGGTGCGCGC CGTGCTCACC GCCTTGGCCC AGGCCGGCGA TCTGGTCGTG
GTGGACCTGC CGCGGTCCCT CGACGAGGCG GCGACCGAGG CGCTGGCGTT GGCGAACGTG
ACGCTCATGC TGGTCCCGGC CGAGGTCCGG GCCTCAGCGG CGGCCTCGCA GCTGGCCGCG
GCGGTCCGGC TGGTCTCGCC GGACCTGCGG GTCGTGGTGC GGCTGCCGGC GCCCGGCGGG
CTGGAACCGC TCGACATAAC GGATGTCATG GGCGGGCTGC CGCTGGCCGG GGTGATCGGC
GCCGACCGCC GGCTCTCGGC CGCCGCCGAG CACGGCGAAC CGCCGGGATC CAGCGCCCGG
GGCACGGTGT CCGCGTTCTG CCGGACCTTC CTGGACGACC TGTTCGGCGT GGCGTCGGGA
CGGCGCTCCG AGTCCCGGGC GGCAGCATGA
|
|---|
| Protein sequence | MRDLTQHPVP GRPGRPRRPD PAPPPGRGPA PAAAPLAVTA DPALADALLR VAAEAGVRIE
IVPGPSAARH RWSAAPLVLI GVDQTGEVAR AGLPHRPDVA LIGRDLDDAS VWQRGSAVGA
AHVLILPDCE RWLAGMLAEA DSPREEPGAV VAVLSGRGGA GGSTLAAALA LAGVRRGLRS
TLVDLDPAGG GIDLLFGLET EPGPRWSELA QWRDGRLSGR SLRDALPTYA AHSRHGLAAG
LGLAEEGADR LPVLAWPRAR PGEDDGPGWL GARPTVAEDP WYDSGAPADP GKADPWLPQD
SAPSGGDIAA GSANPLYGAG SPDIAEDLWS GGGSSRRQET VGPRTGGGRF NADGSSAESL
SRTRLIALEN SDSEVSTEVD DGSRDRDRVA DAARATARPQ HGLPILTYPH TRADLPLPAV
AAEPVRAVLT ALAQAGDLVV VDLPRSLDEA ATEALALANV TLMLVPAEVR ASAAASQLAA
AVRLVSPDLR VVVRLPAPGG LEPLDITDVM GGLPLAGVIG ADRRLSAAAE HGEPPGSSAR
GTVSAFCRTF LDDLFGVASG RRSESRAAA
|
|---|
| |