| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0044 |
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| Symbol | |
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| ID | 8331369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 45480 |
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| End bp | 46550 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953211 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003110840 |
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| Protein GI | 256389276 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAG GCAGCCCAGG CAGCCCCTCC GTGCCAGCCA CCGAACTCCC GGCGTGCTAC
CGGCATCCGG GCCGCGAGGC GCAGATCCGC TGCACCCGCT GCGATCGCCG GATCTGCCCG
GAGTGCATGG TCCCGGCCTC GGTCGGGTTC CAGTGCCCGG AGTGCGTGCG CGGCGGCAAC
CAGGAGGTGC GCAAGGCGCG GTCCCCGTTC GGGGCGGTGC TGCGCCCCCG GGTGGTCCCG
GTCGTCACCT ACAGCCTGAT CGCGCTGAAC TTCGTGATGT TCGGCCTGCA GCACATCGTC
GGCACCTCGC AGGTCGGCGC GGCCGGCGGC GGGGTGTTCC AGGTGAACAC CCTGGACATG
CGGCTGGAGC TGATCGCCAA GGGCACCTGG GTCGACGGCC AGCCGATAGG CGTGGCCAAC
GGCGAGTGGT ACCGCCTGGT CACCTCGATG TTCCTGCACG CGAACCTGAT CCACATCGCC
TCGAACATGA TCTCGCTGTT CTTCATCGGC CCGATGCTGG AGGCGATGCT CGGCCGGCTG
CGGTTCGTGC TGGTCTACCT GATCGGCGGC CTGGCCGGGG CGGTCACGTC CTACTGGTTC
ATGACCCCGC TGAGCCCGGC GAGCCTGGGC GCCTCGGGCG CCATCTCGGC GGTCTTCGGC
TGCCTGGTGG TGATCGGGCT GCGGCGCAAG ATCCTGGACC CCGGGATGAT CGCCGTGGTG
CTGGTGATCA ACATCGTGAT CCCGCTGCAG AACACCAACA TCGACTGGCG CGACCATGTC
GGCGGCGTGG TGGCCGGGGC GCTGATCGGC GCGGTCTACG CCTTCGCCCC GGAGCTCATC
GGCGCGCTCG GCAAGGCCAG GGCGCCACGC GAGCAGCAGG TACGGCTGCT CAACTGGCTC
GGCTTCGGCA CGATGGCGCT GGTCCTGGCC CTGGCGATCG GCGGCACGGC CGTGCACACC
GCCCACCTGA ACGACCCGGC GAACCGGACG CGCACCGTCG ACGGCGCCGT GTACTCACCC
GGCCCGACCA GGGTCGTCAC CGACGTTCCG ACAAGTTATC CACAGGCCTG A
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| Protein sequence | MPPGSPGSPS VPATELPACY RHPGREAQIR CTRCDRRICP ECMVPASVGF QCPECVRGGN
QEVRKARSPF GAVLRPRVVP VVTYSLIALN FVMFGLQHIV GTSQVGAAGG GVFQVNTLDM
RLELIAKGTW VDGQPIGVAN GEWYRLVTSM FLHANLIHIA SNMISLFFIG PMLEAMLGRL
RFVLVYLIGG LAGAVTSYWF MTPLSPASLG ASGAISAVFG CLVVIGLRRK ILDPGMIAVV
LVINIVIPLQ NTNIDWRDHV GGVVAGALIG AVYAFAPELI GALGKARAPR EQQVRLLNWL
GFGTMALVLA LAIGGTAVHT AHLNDPANRT RTVDGAVYSP GPTRVVTDVP TSYPQA
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