Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0023 |
Symbol | |
ID | 8331347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 24190 |
End bp | 24807 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644953189 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003110819 |
Protein GI | 256389255 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACC GTGACGACCT CCTCGCGGGG GCCAAGAAGT GCCTGCTGGA GAAGGGCTAC TCGCGCACCA CGGCGCGCGA CATCGCCCAG GCCTCGGGCG TCAGCCTGGC CGCGATCGGC TACCACTTCG GCTCCAAGGA CGCGCTGATG AACGAGGCGA TGTTCCAGGC CATCGGGGAG TGGGGCGACC ACTTGGAGGA GGCCTTCGCC AAGGCCGGCC CGAATCTGTC GGTCCAGGAG CGCTTCGCCC GGGTCTTCGA CGACGTCTCC GCGACCTTCG ACGAGAACCA GGCGCTGTGG ATGGCCAGCT TCGAGCTGAT CATCGAGATC GACCGCATCC CCGGCGCGCG CGACATGTTC CGGAAGGCGA TCCCGGAGGC GCGCACGGGC CTTGCCAACC TGATCCTCGG CATCCCCGAG GAAGATGTGG ACAAGGACAT GGAGATGGGA GCCGGCGCTG TCCTGTACTC CCTGATGGCC GGTCTGCTCA TCCAACGCTT CGCCGACACC GGGCAGACGC CGACCGGAGC CGATCTGGCC CGAGGACTGC GTCAGCTCGC TGATGTCCTA GAGGCTGATG TCCTTAAGAG CAGCGACAAA GCGGCCGCAG TCTCTTAA
|
Protein sequence | MSNRDDLLAG AKKCLLEKGY SRTTARDIAQ ASGVSLAAIG YHFGSKDALM NEAMFQAIGE WGDHLEEAFA KAGPNLSVQE RFARVFDDVS ATFDENQALW MASFELIIEI DRIPGARDMF RKAIPEARTG LANLILGIPE EDVDKDMEMG AGAVLYSLMA GLLIQRFADT GQTPTGADLA RGLRQLADVL EADVLKSSDK AAAVS
|
| |