Gene Caci_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0023 
Symbol 
ID8331347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp24190 
End bp24807 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID644953189 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003110819 
Protein GI256389255 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC GTGACGACCT CCTCGCGGGG GCCAAGAAGT GCCTGCTGGA GAAGGGCTAC 
TCGCGCACCA CGGCGCGCGA CATCGCCCAG GCCTCGGGCG TCAGCCTGGC CGCGATCGGC
TACCACTTCG GCTCCAAGGA CGCGCTGATG AACGAGGCGA TGTTCCAGGC CATCGGGGAG
TGGGGCGACC ACTTGGAGGA GGCCTTCGCC AAGGCCGGCC CGAATCTGTC GGTCCAGGAG
CGCTTCGCCC GGGTCTTCGA CGACGTCTCC GCGACCTTCG ACGAGAACCA GGCGCTGTGG
ATGGCCAGCT TCGAGCTGAT CATCGAGATC GACCGCATCC CCGGCGCGCG CGACATGTTC
CGGAAGGCGA TCCCGGAGGC GCGCACGGGC CTTGCCAACC TGATCCTCGG CATCCCCGAG
GAAGATGTGG ACAAGGACAT GGAGATGGGA GCCGGCGCTG TCCTGTACTC CCTGATGGCC
GGTCTGCTCA TCCAACGCTT CGCCGACACC GGGCAGACGC CGACCGGAGC CGATCTGGCC
CGAGGACTGC GTCAGCTCGC TGATGTCCTA GAGGCTGATG TCCTTAAGAG CAGCGACAAA
GCGGCCGCAG TCTCTTAA
 
Protein sequence
MSNRDDLLAG AKKCLLEKGY SRTTARDIAQ ASGVSLAAIG YHFGSKDALM NEAMFQAIGE 
WGDHLEEAFA KAGPNLSVQE RFARVFDDVS ATFDENQALW MASFELIIEI DRIPGARDMF
RKAIPEARTG LANLILGIPE EDVDKDMEMG AGAVLYSLMA GLLIQRFADT GQTPTGADLA
RGLRQLADVL EADVLKSSDK AAAVS