Gene Caci_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0019 
Symbol 
ID8331343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp20593 
End bp21360 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID644953185 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003110815 
Protein GI256389251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT GGTCTCGCTC CTTCCCCGGA CTGGCCGAGA ACCTCGCCGA GGTCCGCCAG 
TTCATCCAGA TGGTGCTCGG CGACGCGCCG GGCGCGGAGC TGGTGGTCCT GGCCGGGTCC
GAACTGGCCG GCAACGCCAT CGTGCACACC GCCAGCGGCG CGCCCGGCGG CCAGTTCGTG
GTGCACCTCG CGGCCTTCGC GGACCGCTGG CAGGTGCGGG TCGACGACGC GGGCTCGCCG
ACCGAGCCGC GTGTCCTGGT CGACAGCATG GACGAGCACT GCGACTGGGA CTCGGAGTCC
GGGCGCGGGC TGGCGATGGT CGCCTCGATC TCCCGGAAGT GGGGCGTGCT CGGCGACCGG
GCCGCGCGGG CGGTGTGGGC CGAGATCCCT TGTCCCGTCC CGCCCGGCGG CGGGATCGAG
TCGGTGATGT CCGGCGGCAT GCTCGAAGCC TTGGAGTCCG TGGCACGCGC GCTGGAAAAC
GAAAATCGGC CGCCGTATCA GGAACTTGAT ACTTCTTCAG CCACCGCGCC CGCGACGGCC
GCTGTCCCTT CTGTGGCCAT CGCGCCGGCG CGGTGGCCTG GAACGATGCC CAGCGATCCG
GCGCGGGCCG AACGGATCCG GCGGCAGGCC AGCCACGCCG CCTTCCAGCG CGCGCTGATC
GAGAGCGCGT ACGCCGAAAC GCTCGGGCCG CGTCCGCTGC CGTACTGGCC ACCGTTCCCG
AATCCGCTTG CTCTGCAAGG GTCTTCGCCC GGGACGCGTC CTCGATAG
 
Protein sequence
MSYWSRSFPG LAENLAEVRQ FIQMVLGDAP GAELVVLAGS ELAGNAIVHT ASGAPGGQFV 
VHLAAFADRW QVRVDDAGSP TEPRVLVDSM DEHCDWDSES GRGLAMVASI SRKWGVLGDR
AARAVWAEIP CPVPPGGGIE SVMSGGMLEA LESVARALEN ENRPPYQELD TSSATAPATA
AVPSVAIAPA RWPGTMPSDP ARAERIRRQA SHAAFQRALI ESAYAETLGP RPLPYWPPFP
NPLALQGSSP GTRPR