Gene Caci_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0015 
Symbol 
ID8331339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp16967 
End bp17629 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID644953181 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003110811 
Protein GI256389247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC ACGTTGACTA CGCGGCACAA AGGGCCTTCT CACGGATCAT CGCCGGTCTG 
CGCTCGGCCC GCTTGGACGC CGAACTCTCG CAGAACGCCC TCGCCACCGG GCTGCCGGTC
CGGGGCAGGG CGGTCTCCGA GTGGGAGACC GGGGCGATAG AACCGACCCT GGGCCACCTG
ATCCAGTGGT CCTGGGAACT GGGGCGGCGG CTGGTGATCG TCGGGCGCGA CGGCGAACTG
CGCTACGGCC CGGTGCGCCA GCGGCCGGGC GAGTTGTGGG AGGCCTTCGA GCGACGGCGA
CTGGCCGTCC CGTTACGGAA CCGCCGCCTG GCCTTGGGTA TGGCGCAAGG CGAACTCGGC
GAACTCGTCG GTGTCAGCCG CGATTCGATC CAGCGGTGGG AGCTGGTCCG CGTGCCCCCG
AGACCGATCG CGCACGTCGT GTGGGCGCAG AAACTCGGGT ACTCACTGGA TACTCGCCCT
GTCGCGGACG GCGGCCCGCG TCTGCGGCGT GTCGGCTCCG CGGGGCTGGC GCTGCCAGGA
CTGTCAGGGC AGATAGGGCA GCAAGGACAA CCAGGGCTGA CGGGACAAGC AGAGCGCTCG
GCGTCCGGAC CCGGCTCGCC CGCCGGTGAG CTTCGAGCCG CTGCGGACGG TCGGCGTGGA
TGA
 
Protein sequence
MALHVDYAAQ RAFSRIIAGL RSARLDAELS QNALATGLPV RGRAVSEWET GAIEPTLGHL 
IQWSWELGRR LVIVGRDGEL RYGPVRQRPG ELWEAFERRR LAVPLRNRRL ALGMAQGELG
ELVGVSRDSI QRWELVRVPP RPIAHVVWAQ KLGYSLDTRP VADGGPRLRR VGSAGLALPG
LSGQIGQQGQ PGLTGQAERS ASGPGSPAGE LRAAADGRRG