Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0007 |
Symbol | |
ID | 8331330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9293 |
End bp | 11920 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953172 |
Product | DNA gyrase subunit A |
Protein accession | YP_003110803 |
Protein GI | 256389239 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.876673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.542792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGAGA CGCCGCAGGG GGACCGGATC GACCCGGTCG ACCTCCAGAC GGAGATGCAG CGCTCGTACC TGGATTACGC GATGAGCGTG ATCGTCGGCC GCGCGCTGCC CGACGTCCGG GACGGCCTGA AGCCGGTGCA CCGCCGCGTC CTGTACGCGA TGTACGACGG CGGCTACCGG CCGGAGAAGG GCTACTACAA GTGCGCCCGC GTCGTCGGCG AAGTCATGGG TATCTACCAC CCGCACGGCG ACTCCCCGAT CTACGACACC CTGGTCCGTC TGGCGCAGCC CTGGTCGCTG CGGATGGTGC TGGTCGACGG CAACGGCAAC TTCGGCTCCC CGGGCAACGA CCCGGCCGCG GCCATGCGGT ACACCGAGTG CAAGATGGCG CCGCTGGCCA TGGAGATGGT GCGGGACATC GACGAGGACA CCGTCGATTT CCGCCCCAAC TACGACGGCC GCTCCTCCGA GCCGGTGGTG CTGCCCGCGC GCTTCCCCAA CCTGTTGGTG AACGGCTCGA CCGGCATCGC GGTCGGCATG GCGACCAACA TCCCGAGCCA CAACCTGCGC GAGGTCAACG ACGGCGTCCA GTGGTTCCTG CAGAACCCCG AGGCGACCAA CGAGGAACTC CTGGAAGCGC TCATCGAGCG CATCAAGGGC CCGGACTTCC CGACCGGCGC GCTGATCGTC GGCCGCCGCG GCATCGAGGA CGCCTACCGG ACCGGCCGCG GCTCGATCAC CATGCGCGCG GTGGTGAACA CCGAGGAGAT CAACGGGCGC ATGTGCCTGG TGGTCACCGA GCTGCCCTAC CAGGTGAACC CCGACAACCT GGCGCTGAAG ATCGCCGAGC TGGTGAAGGA CGGCAAGGTC GCCGGCATCG CCGACGTCCG CGACGAGTCC TCCTCCCGGA CCGGCCAGCG CCTGGTGATC GTCCTGAAGC GGGACGCGGT CGCCAAGGTC GTGCTGAACA ACCTCTACAA GCACACGCAG CTGCAGGACT CCTTCGGCGC GAACATGCTG GCGCTGGTCG ACGACGTGCC GCGCACGCTG TCGCTGGACG CCTTCATCCG GCACTGGGTC ACGCACCAGA TCGACGTGAT CGTGCGCCGC ACCCGCTTCC GCCTGCGCAA GGCCCAGGAG CGCGCACACA TCCTGGTCGG GCTGCTCAAA GCGCTGGACG CGATCGACGA GGTGGTGGCG CTGATCCGCC GCTCCCCCAC GGTCGACGAG GCGCGCAGCG GCCTGATCGA GCTGCTCACC ATCGACGAGA TCCAGGCCAA CGCGATCCTG GAGATGCAGC TGCGCCGGCT GGCCGCCCTG GAGCGGCAGC GGATCGAGGC CGAGCACAAC GAGCTGATGG CCAAGATCGC GGACTACACC GCGATCCTGG AGTCGCCGGA GCGGCAGCGG CGTATCGTCT CGGAGGAGCT GCAGGCGATC TCCGACAAGT ACGGCGACGA CCGCCGCTCG CAGCTGGTGC CCTACGAGGG CGACATGTCC ATCGAGGACC TGATCCCCGA GGAGGACGTG GTCGTCACGA TCACCCGCGG CGGCTACACC CGGCGGACCA GGACGGACCT GTACCGCTCG CAGAAGCGCG GCGGCAAGGG CGTCAAGGGC GCGCAGCTGA AGCAGGACGA CATCGTCGAC CACTTCTTCG TCACCACGAC GCACCACTGG CTGCTGTTCT TCACGAACAA GGGCCGGGTG TACCGGGCCA AGGCGCACGA GCTGCCGGAC ACGGCCCGCG ACGCGCGCGG CCAGCATGTC GCGAACCTGC TGGCGTTCCT GCCGGACGAG AAGATCGCCC AGGTGCTCGA CCTGCGGGAC TACGAGCAGA CGCCGTATCT GGTGCTGGCG ACCAAGAACG GCCTGATCAA GAAGACCCCG CTGAAGGACT ACGACTCGCC GCGCTCGGCC GGCGTCATCG CGATCAACCT GCGCGAGGAC GACGAGCTGA TCGCCGCCGA GCTGGTCTCC CCCGAGGACG ACCTGCTGCT GGTCTCCAAG CAGGCGCAGG GTCTGCGCTT CACCGCGACC GACGAGGCGC TGCGGCCGAT GGGCCGGGCC ACCTCGGGCG TGATCGGCAT GCGCTTCCGC GAGGACGACG AACTGCTGTC GATGGACGTG GTCCGCCCGG ACACCTTCCT GTTCACGGCG ACCTCCGGCG GCTACGGCAA GCGGACCGCG GTGGAGATGT TCCCGCTGCG CGGCCGCGGC GGCCTGGGCG TGATCGCGGC CAAGACCGTC GACGAGCGCG GCGGCCTGGT CGGCGCCGCG GTAGTGGACG AGGGCGACGA GGTCATGGCC ATCACGCTGT CCGGCGGCGT GATCCGGACG CGGGTGTCGG AGGTGCGGCC CACCTCGCGC GACACCATGG GCGTGCGGGT GATCAACCTC GGCAAGGGCG ACACGGTGCT CGCGATCGCG CGCAACGGCG ACCCCGGCGA GGTCGAGGAC GAGCTCGGCG AGGAGGCCGG CGCGCCGGCC GAGGCGGCGG GCGCCGACGT GGTGGCCGAG GCTCGCGAGA ACGGTGCGGT GGTCGAGGCT TCGGAAGGCT CTGAGGTTAT TGACGAGTCG GAGGGCTCTG ACGAGTCGGA CGGCTCGGAG GCCTCCAGCG AGGAGTGA
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Protein sequence | MDETPQGDRI DPVDLQTEMQ RSYLDYAMSV IVGRALPDVR DGLKPVHRRV LYAMYDGGYR PEKGYYKCAR VVGEVMGIYH PHGDSPIYDT LVRLAQPWSL RMVLVDGNGN FGSPGNDPAA AMRYTECKMA PLAMEMVRDI DEDTVDFRPN YDGRSSEPVV LPARFPNLLV NGSTGIAVGM ATNIPSHNLR EVNDGVQWFL QNPEATNEEL LEALIERIKG PDFPTGALIV GRRGIEDAYR TGRGSITMRA VVNTEEINGR MCLVVTELPY QVNPDNLALK IAELVKDGKV AGIADVRDES SSRTGQRLVI VLKRDAVAKV VLNNLYKHTQ LQDSFGANML ALVDDVPRTL SLDAFIRHWV THQIDVIVRR TRFRLRKAQE RAHILVGLLK ALDAIDEVVA LIRRSPTVDE ARSGLIELLT IDEIQANAIL EMQLRRLAAL ERQRIEAEHN ELMAKIADYT AILESPERQR RIVSEELQAI SDKYGDDRRS QLVPYEGDMS IEDLIPEEDV VVTITRGGYT RRTRTDLYRS QKRGGKGVKG AQLKQDDIVD HFFVTTTHHW LLFFTNKGRV YRAKAHELPD TARDARGQHV ANLLAFLPDE KIAQVLDLRD YEQTPYLVLA TKNGLIKKTP LKDYDSPRSA GVIAINLRED DELIAAELVS PEDDLLLVSK QAQGLRFTAT DEALRPMGRA TSGVIGMRFR EDDELLSMDV VRPDTFLFTA TSGGYGKRTA VEMFPLRGRG GLGVIAAKTV DERGGLVGAA VVDEGDEVMA ITLSGGVIRT RVSEVRPTSR DTMGVRVINL GKGDTVLAIA RNGDPGEVED ELGEEAGAPA EAAGADVVAE ARENGAVVEA SEGSEVIDES EGSDESDGSE ASSEE
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