| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2009 |
|---|
| Symbol | |
|---|
| ID | 8324109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 2128009 |
|---|
| End bp | 2129424 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644953134 |
|---|
| Product | pyridine nucleotide-disulphide oxidoreductase dimerization region |
|---|
| Protein accession | YP_003110584 |
|---|
| Protein GI | 256372760 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR02053] mercuric reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATGA GCACCCTTCA CGCATCCGCT CCCTGGGATC TCGGCATCAT CGGCTCTGGC
TCAGCCGCCT TTGCCGCCGC GCTCGAGGCT CGCGCACGCG GCGCCTCGGT CGTCCTGATC
GAACGCGATG CGCTGGGCGG CACCTGCGTG AACGTGGGTT GCGTGCCCTC GAAGGCACTG
CTCGTCGCGG CACACCGCCG AAGCCTCGCC GCATCGGCGT ACCCGGGCCT CGGAGCCGAG
ACACTCCCCA TCGACCACGA CGAACTCGCT GCCGGGGTTC GCGGCGTGGT TTCGAGCCTC
GTCAAGCGGA AGTACCGCGA TCTCGCTGAG CGGATGGGGA TCGACGTACG CTACGGTACT
GCGCGCTTCG TGTCCGACGA GACGGTGAGC GTCGGCGGTG ACGAGCTCAC CGCGCGCCGC
TGGATCATCG CAACCGGTGC CCATGCGGTA CTGCCATCGG TCGACGGTCT CGACCCAGCG
GAGCTCTGGA CCTCCACCGA CGCTCTCACG GCGCTCGAGA TTCCCGCTCG CGTCGCGATC
ATCGGCGCCG GCTCGATCGG TCTCGAACTC GCGACCGCCT ACAGCGGGCT CGGAGCCCGG
GTCCACCTGA TCGAGAGCAC TCCCCAGGCT GTCGCGAGTG CGCCGCTCGA ACTGACAGGA
GCCCTGGTCG AGCACCTCCG CGCATCCGGT GTCGCCGTGG CGCTCACGAC CACGGTCGGT
TCTGCACAGG CGACGACCTC AGGGTGGCTC CTCCAGCTGC AAGGACCAGA AGGTGCGACG
CAGGTGGAGG TCGATCGGGT GATCGCGGCC GTGGGTCGGC GCCCCACCAC CGAGAATCTG
GGGCTGGAGA CGGTCGGCGT CGAACTCGGG GCCCGCGGGG AAGTCGTCGT CGACGCCACC
ATGCGTACGT CGAATCGAGG CATCTGGGCG GCCGGCGACG TGACCGGCGG ACCCCAGTAC
GTCTACGTCG CTGCCGCCCA GGGCGCGCTC GCAGCCCGCA ACGCCCTCTC CGACGGTGAC
GAGCACTTCG ACGACCGCGC GATTCCCGCC GTCGTCTTCA CCGATCCGCC CCTGGCCCAG
GTCGGTCTGA CGCTCGACGA GGCACAACAC CAGGGCTACG ACGCCGAGTC GACCACCTTC
TCGTTCGCCG ATCTCCCACG TGCAATCGTC GAGCACGCGA CCGAGGGCCT GGCCGTCATG
GTCGCAGAAC GCACGAGTGG GCGCCTCCTC GGCGTGCACC TCTGGGGCGT GAACGCAGCC
GAAGTCATCC AGAGCGCCGT GCTCGCACTC CGCACCAATC TCACGATCAG CGACCTCGCG
ACAACGTGGG CACCCTACCT CACGGCCTCC GAGGCGCTTC GGCTCGCAGC ACAGAGCTTC
ACAACGGACG TCGCGAACCT GTCCTGCTGC GCCTAG
|
|---|
| Protein sequence | MVMSTLHASA PWDLGIIGSG SAAFAAALEA RARGASVVLI ERDALGGTCV NVGCVPSKAL
LVAAHRRSLA ASAYPGLGAE TLPIDHDELA AGVRGVVSSL VKRKYRDLAE RMGIDVRYGT
ARFVSDETVS VGGDELTARR WIIATGAHAV LPSVDGLDPA ELWTSTDALT ALEIPARVAI
IGAGSIGLEL ATAYSGLGAR VHLIESTPQA VASAPLELTG ALVEHLRASG VAVALTTTVG
SAQATTSGWL LQLQGPEGAT QVEVDRVIAA VGRRPTTENL GLETVGVELG ARGEVVVDAT
MRTSNRGIWA AGDVTGGPQY VYVAAAQGAL AARNALSDGD EHFDDRAIPA VVFTDPPLAQ
VGLTLDEAQH QGYDAESTTF SFADLPRAIV EHATEGLAVM VAERTSGRLL GVHLWGVNAA
EVIQSAVLAL RTNLTISDLA TTWAPYLTAS EALRLAAQSF TTDVANLSCC A
|
|---|
| |