Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1969 |
Symbol | |
ID | 8324069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 2068560 |
End bp | 2070023 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644953096 |
Product | amino acid permease-associated region |
Protein accession | YP_003110546 |
Protein GI | 256372722 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0833] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0135269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCACGT CCTCCGAGCA CCGCCTCTCC GCCAACGCCA TCGGACGGCG CGAGGTCCTC TTCCAGAGCG TCACCGCGAT GGCACCCGGC GCCGCCATCG CGGCTTCGAT CCCGGCCGGT GCAGGCTTCG CTGGGGGAGC GCTTGCCCTC GCGGTCGTCG TGGCGCTGAT CGGAAGCCTG CTCACTGCCC TCTCGATCGG TGAGCTCGCC TCTCGGTTCC CGTCAGCTGG GTCGTTCGCC ACCTACGCAT CGAAGGCACT CCACCCCATC GTCGGCTTCT TCGTTGGCTG GTCCTACGTG TTCGTCTACG CCCTGGTGCC CGCACTCCTG TTTCTGCAGC TCGGCTTCAC GGTCGCGGGG ACCCTCCACA GCGAGTTCGG CTACCCGGCA TCGCTCTGGT GGCCATGGTC GCTCGCGGGT ATCGCGCTCG TGGGAACCTT GGCGTTGCTC GGTATCTCGA CATCGGCCAA GGCCGGGACC ATCCTCGGCG CGATCGAGAT CTCCGTGTTC GTCGTCGCAG CGATCCTGTT CATCATCCAC GCCGGCTCGC ACAACTCGTT GACGCCGTTC ACGACCCGAG ACACCCCCCA TGCGTTCCCC GGCCTGACCG GCGTGTTCGC CGGCTCCGTC TACAGCCTCC TCGCCTTCGC GGGCTTCGAG GCAGCCGCTC CGCTCGCCGA GGAGGCGCGC GATCCGAAGC GCACCGTCCG CTTCGCCATT CTCGGCTCGA CCCTTATCAT CGGCCTCATC TACGTCTTCA CCACCTACGC CGCCGAGGTC GCCGCCGGAC CCAGCCACTT CGCGTCCTTT GCCGGGGCTG GCGCCGAGTC GTGGATTGGT CTCTCGAGGA GCTTCTTCGG TATCTTCTGG GTGCTCGTGT TCCTCGCCAT CTTGAACTCG ACGATCGGCA ACGCCAATGC GGGTACGTCG GTGTCGACGA GGATGGCCTT TGCGCTCGGA CGCATTGGGG TGTTCCCCAC CCTGCTCGGA CGGGTTCACG AGAAGACGAA GGTTCCCCAC GTCGCCGTCT ACTCCCAAAT CATCGTCTCC GCCGTCGCAA CACTCATCCT GGGGCTCGCC TTCGGACCGG AGAACGGCTT CGCTCTCGAC GGCACGATCA TCACCATCGT CGTCGTCGCG GTCTACATCG TCATGAACCT CGCTGCACTC GTCTACTTCG CACGTCGCGC AAATGGAGAG CGCTTCAACC CACTCCTCCA CGGCCTCGCG CCGATCGTCG CCATCGCCTT CCTCCTCCCC GCGCTCCTCG CCGGGGCCGG CATCGCTGTC TTCTCGTTCA TCTCACCGCT GACCCCACCG GCGTCCTACG CTGGTCCCAT CGTCGCCGTG TGGCTGGTCG TGGGGATCGT CGTGTTCTTG AACCTGCGTG CACGTGCGCC ACAGGCCGTC GGACGGATTG CCGAGGTCTA CCTCGACGAC GTCCTCGATG TCGAGGAGGC ATGA
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Protein sequence | MSTSSEHRLS ANAIGRREVL FQSVTAMAPG AAIAASIPAG AGFAGGALAL AVVVALIGSL LTALSIGELA SRFPSAGSFA TYASKALHPI VGFFVGWSYV FVYALVPALL FLQLGFTVAG TLHSEFGYPA SLWWPWSLAG IALVGTLALL GISTSAKAGT ILGAIEISVF VVAAILFIIH AGSHNSLTPF TTRDTPHAFP GLTGVFAGSV YSLLAFAGFE AAAPLAEEAR DPKRTVRFAI LGSTLIIGLI YVFTTYAAEV AAGPSHFASF AGAGAESWIG LSRSFFGIFW VLVFLAILNS TIGNANAGTS VSTRMAFALG RIGVFPTLLG RVHEKTKVPH VAVYSQIIVS AVATLILGLA FGPENGFALD GTIITIVVVA VYIVMNLAAL VYFARRANGE RFNPLLHGLA PIVAIAFLLP ALLAGAGIAV FSFISPLTPP ASYAGPIVAV WLVVGIVVFL NLRARAPQAV GRIAEVYLDD VLDVEEA
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