Gene Afer_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1961 
Symbol 
ID8324061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp2058643 
End bp2059260 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content71% 
IMG OID644953088 
ProductGrpE protein 
Protein accessionYP_003110538 
Protein GI256372714 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.388028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGC CGTACGGAGA CGACGCCGAC GAGCCGGTGA CGCCGTCCGA GGACGCCACG 
CCCGTCGGGG GGTCCCCCCC CGACGGGACG ACCGGCGACG ACGAGCCGAC CGCGGAGGTG 
CAGCCGAGCC CCGACGACGA GGGGCGAGAG AGCGATCCGG TCCTCGCGGC GATCATGGAG 
GACCTCGCAG CCGTCACACG GGAGCGCGAC GAGTTCCTCG AGACCGCACA GCGGCTCCAG 
GCGGAGTTCA AGAACTACCG CGAGCGTGTC GCGCGCCAAC AGGCCGAGGC CGGTCAAGCT 
GCGGTCGCGA GCTTCGTGAC GAAGCTCCTG CCGGCGCTCG ACACCTTGAA CCTCGCCCTC 
GCCCACGCCC GTGCGGAGGG CTCCGAGGAG ACGACGAGTG CGCTCGCCCA GGTGCACGGC 
GTCTTCCACG AGGTGCTGAC CAAGGAAGGG CTCGAGGTCG TCGAGCCCAT CGGCAAGCGC 
TTCGACCCGA CCGAGGCCGA TGCGGTGGCC CACGAGGAGG GCGAGGGCGA GCCCACGGTC 
ACGGAGGTGT TCCGGGCGGG GTACCGCTGG CGCGGACAGG TCATCCGACC AGCGATGGTG 
CGTGTGAGCG GATCGTGA
 
Protein sequence
MGKPYGDDAD EPVTPSEDAT PVGGSPPDGT TGDDEPTAEV QPSPDDEGRE SDPVLAAIME 
DLAAVTRERD EFLETAQRLQ AEFKNYRERV ARQQAEAGQA AVASFVTKLL PALDTLNLAL 
AHARAEGSEE TTSALAQVHG VFHEVLTKEG LEVVEPIGKR FDPTEADAVA HEEGEGEPTV 
TEVFRAGYRW RGQVIRPAMV RVSGS