Gene Afer_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1901 
Symbol 
ID8323997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1987964 
End bp1988443 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID644953025 
Producttranscriptional regulator, CarD family 
Protein accessionYP_003110479 
Protein GI256372655 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.488949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCATTCG ACGTCGGTGA CAAGGTCGTC TACCCGCAGC ATGGTGCCGC TGTGATCACC 
GGACGGGAGG TCGTCGAGGC CTTCGGTGAG GCCAAGGAGT ACTTCGTCGT CACGGTGGCC 
TATGGCGATC TCACCGTACG CTTGCCCGTC GACGCCGTCG ACGAGGTCGG CCTGCGCGAG 
GTGATCAACG ACGAAGAGGT CGAAGAGGTC TTCGCCGTTC TGGGGAAGAA GGACGTGCGC 
ATGCCCGCGA ACTGGTCGCG GCGCTACAAG AACCACCTCG AGAAGGTCAA GTCCGGCGAC 
ATCTACCAGG TCGCCGAGGT GGTGCGCAAC CTGACGCTGC GCGATCACGA CAAGGGGCTC 
TCGGCCGGGG AGCGCCGCAT GCTCGCCAAG GCGCGCCAGG TGTTGGTCTC CGAGCTGACC 
TTCGCCCTCG ACGTCGCGCC CGAGGAAGCG GAGGCTCGAC TCGACAAGGC CCTCGCGTAG
 
Protein sequence
MPFDVGDKVV YPQHGAAVIT GREVVEAFGE AKEYFVVTVA YGDLTVRLPV DAVDEVGLRE 
VINDEEVEEV FAVLGKKDVR MPANWSRRYK NHLEKVKSGD IYQVAEVVRN LTLRDHDKGL 
SAGERRMLAK ARQVLVSELT FALDVAPEEA EARLDKALA