| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1871 |
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| Symbol | |
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| ID | 8323967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1956309 |
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| End bp | 1959158 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644953001 |
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| Product | protein of unknown function UPF0182 |
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| Protein accession | YP_003110455 |
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| Protein GI | 256372631 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1615] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.204028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCC CCCAGGACAT GACCCGGGAG CGTCGCGGAC CATCACGGGC GCAGCTCATC
CTCGTCGGCG TGGTCGTCAT CGCGATCGTG TTGCTGCTGT CGCTCAAGGG TCTCGCCGTC
TTCTTCACGG ATTACCTCTG GTTCTCGAAC TATCACCTCG GCGAGGTGTG GAGCGGGGTC
CTGCTCGCCA AGGTCGAGCT GTGGGTCGTG TTCGCGGCGA TCTACCTCGC AGGGGCGCTC
ACCAGCATGG TCGTCGCGCA ACGCCAGGGC CTGCGCCAAC CGGCCGACCA CGACGACGAA
CTGGTGCAGC GCTATCGCGC CTTCGCCAAC CGTCGTCGGT GGGTGCTGCC CGTCGTGCTC
GCCGTGGTGA CGACGCTCAT CGTCGCCTCC CAAGCACCTG CCGAATGGAA GAACTGGCTG
CTCTTCGGCC ACAGCGAGTC CTTCCCGATG CGAGACCCCG AATTTCACGT CAACGTTGGG
TTCTACGTCT TTCGACTCCC GTTCATCGAG TTCCTGATCT CGTGGTTCTT CCTTGCTGCG
GCCTTCACGT TCGTGCTCAC CGCGGTCGTC GGGTACCTGA CCGGATCGAT CCAGCCCCAG
CGCCGAGAGC AGCGGGTCGC ACCCTCGATG AAGGCCCACC TGTCGGTCCT GCTCGCAGTG
ATGGCCCTCA TCAAGGCCAT TGGTTACTAC TTCCAGCGTT ACCAGTTGGA CTTCTCGACC
AGGGGCTTCG TCGAGGGAGC GAGCTACACC GACGTCCACG CCCAGCTCCC CGCGATCAAT
CTGCTGATCT TCATCTCCGC GGTGGCCTGC GTCCTGTTCG TCATCAACAT CTTCCGTCAG
GGTTGGGTGT TGCCGGTCAT CGGGCTGGGC CTGTGGGCGT TCATCTCGAT CGTGCTGGGA
GCGATCTATC CGGCCATCAT CCAGAAGTTC GTGGTGGATC CCGCCCAGGG TCAGAAGGAG
CTTCCCTACA TCGCGCGCAA CATCGCTGCG ACGCGCTACG CCTACGACAT CGCCGATGTT
CCCTCAGAGC CCTATTCTGC GACCGCGAAT ACGAGTTCGT CGGTGGAGCA GGCGAACCTG
GACTCCCTTG GCGCGGCGCG GCTCTGGGGA ACCTCGACGC CCCAGCAGAC CTTCGGCAAG
CTCCAGGCCA TTCGCTCGTA CTACCAGTTC CCCTCGCTCT CGATCGAGAA CGACACGATC
AACGGCAAGC CCACACCGGT CATCATCGGC GTTCGAGAGC TGAACGCAGC GAACCTTCCA
GCCCAGTCCT GGGTCAACCA GCATCTGCAG TTCACGCATG GTTACGGTGT CGCGCTGGCA
CCGGCGAACG AGATCTCGGC CGCGGGCAAC CCCATCTTCT TGATCCGTGA TCTTCCGCCG
ACCTCGTCGG GCGGTGCTCC GACGCTCACG CAGCCGCAGG TCTACTACGG CCAAGGTCTC
TCGGGCTACG TGATCGCTGA CAGCCGCCAA GCGGAGATCG ACTACCAGCT CCCCGATGGG
GCGTCGTCGG AGACCCACTA CGCCGGCTCG GGCGGTGTCC GACTCTCGTC GCTGCTCGTG
CGTGCGGCAT TTGCGATGCG CTTCGGCGAC ATCAACATCC TGGTGTCGAG CCTGCTGACC
ACCCACTCGC GCATCATGTT CGAGCGCGAT CTCCTCCAGC GCGTCGAGAT GGCCATGCCG
GTGTTGCACT ACGGGTCGAA TCCCTATCCG GTGATCGTCG ACGGCCACAT CGACTGGGTC
ATCAACGGCT ACACCACCAC AGCGAACTTC CCCTATTCGG AGCAGGCCAA CACGCAGGCG
CTGTCGTCGA GCGCACCGCT TGCCAACACG TCGTTCAACT ACGTTCGCAA CTCGGTGAAG
GTGGTCGTGA ACGCCTACAC CGGTGCCATG CACTTCTATG TCACCGACCC CTCGGATCCG
ATCATCCAGG CCTACGAGGC GGCGTTTCCC CATGTCTTCC AGCCGGTCTC GGCGATGCCA
GCCGCGATCG CGAGTCACCT CCGCTACCCG AGTGATCTCC TCGCCGTGCA GTCGGCGATG
TACGGCATCT ACCACGTGAC GAATCCGTCG ACGTTCTACT CGGGTGGCAA CGCGTGGTCG
CTGTCGGCAC AGCCGCAGAA CGGCTCGATC TCGTCGGGAA GCTCGTTCAG CTTCGGCGGC
ACGAGCCAAA ACCTGATGAG CCCGATCTAC GAGATGGCAA AGGTGCCCGG CACCTCCTCG
CCGCAGCTGG CACTGATGGA GGCATTCGTG CCGTTCTCGC AGAGCGGCGG GCAGCAGAAC
CTGACCGGCC TGCTCTTTGG CGAGGCGTCG GCGTCCGATC CGACGCAGCT CGTGGCGTTG
ACGACTCCGA GTTCGGGCCA GATCGACGGC CCCGCATTGG TTGCGTCGCG CATCGTGTCT
GCGACCAATG TGTCTCAGGA GATCACGCTG CTCGACCAGC ACGGCTCGAA CGTGTCGCTC
GGGGGCCTCA CGGCGCTACC GCTCGGTCAG AACCTCCTGT GGGTTCGCCC GATGTACGTC
TCGAGCCAGG CGAATCCGCT GCCTGAGATC AAGGAAGTGA TCGGCGTGTA CGGGACGCAG
GTTGCGATGG AGCCGACGTT CGCGGGTGTC CTGCGCGACA TCTTCGGCGT CGTGCCGTCG
GGCGTGCAGG GTTCGTCGCG CACGTCGACG ACGGCTACCG TTCCGAGTTC AGCCGCCGGG
CTGCTCGCCA AGGCCGATCA GCTCTACAGT GAGGCGCAAG CCGCCTTGAA GTCCGGCAAC
CTCGGGGCCT ACCAGAGCGA CATCGAGCAG ATCGGTCAGA TCCTGTCGGA GCTCAAGGCC
GCGAGCGTGA CCGGCAAGGC GGCGGGGTAG
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| Protein sequence | MRVPQDMTRE RRGPSRAQLI LVGVVVIAIV LLLSLKGLAV FFTDYLWFSN YHLGEVWSGV
LLAKVELWVV FAAIYLAGAL TSMVVAQRQG LRQPADHDDE LVQRYRAFAN RRRWVLPVVL
AVVTTLIVAS QAPAEWKNWL LFGHSESFPM RDPEFHVNVG FYVFRLPFIE FLISWFFLAA
AFTFVLTAVV GYLTGSIQPQ RREQRVAPSM KAHLSVLLAV MALIKAIGYY FQRYQLDFST
RGFVEGASYT DVHAQLPAIN LLIFISAVAC VLFVINIFRQ GWVLPVIGLG LWAFISIVLG
AIYPAIIQKF VVDPAQGQKE LPYIARNIAA TRYAYDIADV PSEPYSATAN TSSSVEQANL
DSLGAARLWG TSTPQQTFGK LQAIRSYYQF PSLSIENDTI NGKPTPVIIG VRELNAANLP
AQSWVNQHLQ FTHGYGVALA PANEISAAGN PIFLIRDLPP TSSGGAPTLT QPQVYYGQGL
SGYVIADSRQ AEIDYQLPDG ASSETHYAGS GGVRLSSLLV RAAFAMRFGD INILVSSLLT
THSRIMFERD LLQRVEMAMP VLHYGSNPYP VIVDGHIDWV INGYTTTANF PYSEQANTQA
LSSSAPLANT SFNYVRNSVK VVVNAYTGAM HFYVTDPSDP IIQAYEAAFP HVFQPVSAMP
AAIASHLRYP SDLLAVQSAM YGIYHVTNPS TFYSGGNAWS LSAQPQNGSI SSGSSFSFGG
TSQNLMSPIY EMAKVPGTSS PQLALMEAFV PFSQSGGQQN LTGLLFGEAS ASDPTQLVAL
TTPSSGQIDG PALVASRIVS ATNVSQEITL LDQHGSNVSL GGLTALPLGQ NLLWVRPMYV
SSQANPLPEI KEVIGVYGTQ VAMEPTFAGV LRDIFGVVPS GVQGSSRTST TATVPSSAAG
LLAKADQLYS EAQAALKSGN LGAYQSDIEQ IGQILSELKA ASVTGKAAG
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