Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1831 |
Symbol | |
ID | 8323925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1917022 |
End bp | 1918365 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952962 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_003110418 |
Protein GI | 256372594 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGTCA TCGTCGTCGG GGGAGGCATC AGCGGACTTG CGGCTGCATG GGAGGCGGCG CGCCACGGTG CATCCGTCAT GCTCCTCGAG TCCTCCGACC GGCTCGGGGG CAAGCTCCTG ACCTCACACG TCGGCGGCTC GCTCGTCGAA CTCGGCCCTG ATTCGCTCCT CACTCGCACA CCGAGTGCCC TCGAACTCGT CGACTCGCTC GGACTCGACC TCGTGGCTCC CACAGCCAGC CGAGCTCTGC TCTGGTCGCG AGGTGCGCGC CGCCCCATCC CTCCAGGCCT CGTGCTCGGC GCACCACCGA ACCTCGAACG TGCGCTCAGC TCGGATCTCG TCGGTCCCAT CACTCGCCTT CGCGCCGCGT GGGGTGTGAT CGCGCGATCC CGGCGTGGCC ACGAGACCGA CGACCTCGGT CGACTCGCAG CGTGGCGTTG GGGGCGAACC TGGAGCGAAC GACACATCGA GCCACTCGTC GGGGGAATCA ACGCCAACAC CATCGTGGGC CTGAGCGCCC GGGTGAGCGC ACCCAGCATC CTCTCGATGC CGCCCAGCGG CCCACCAGCA CCAGCCCCCT CCCGACCGAC GCGCCCTGCG TTCGTCGCCC CTTCTGGAGG CCTCTCCACC CTCGTGGACG CCGTAGCGCA GGTCCTCGTG GACCTCGGCG TCGATGTGCG CTCCTCCACC TCGGTCACCG AACTCGCTCC GGCCCCTCAC GGCACCGCCG TCACCACCTC CGACGGCAGC TCGTTCAGCG CTGATGCCGT CGTCCTCGCT GTACCGGCCT TCCGTGCGGC CGAGATCCTT GCGGCCTCAG CGCCCGAAGC CAGCCTCCTG CTTCGCGGGA TTCGCTACGC ATCCGTCAGC GTCCTGGCCC TCTCGATCGC GCCGACGCTC GCGCCGTCGC TCAAGGGCGT CGCGGGGGTG CTCGTCGACC GACGCGAGGG TCTCATGACC ACCGCCGTCT CGCTGGCGTC CGAGAAGTGG CCGCACTGGG CAGGGGACGA CGCGTTGCTC CGCGTGTCGG CGGGCAACCT CCACGACGTG CGCCCGCTCG ATCGGGACGA CGATCGCCTG CGCGACGATC TCGTCGCCGA GGCCGAGGGC ATCCTCGAGG CGACCCTCGA GATCCGCGAT GCCCGACTCG CGAGATGGAC GAACGCCTTC CCTCACTTCG CGCCGTGGCA TCTCGATCTC GTGGAGCGAA TCGATCGCGA ACTGCGCGAC GCACTGGGCT CGACCGTGGC GCTCGCCGGC GCGTGGCGTC GCGGGAGCGG CATCCCGACG TGCATCGCGA GCGGACGCGA CGCTGCTCGA GCGACGATCA GCCGAGACAA CTGA
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Protein sequence | MNVIVVGGGI SGLAAAWEAA RHGASVMLLE SSDRLGGKLL TSHVGGSLVE LGPDSLLTRT PSALELVDSL GLDLVAPTAS RALLWSRGAR RPIPPGLVLG APPNLERALS SDLVGPITRL RAAWGVIARS RRGHETDDLG RLAAWRWGRT WSERHIEPLV GGINANTIVG LSARVSAPSI LSMPPSGPPA PAPSRPTRPA FVAPSGGLST LVDAVAQVLV DLGVDVRSST SVTELAPAPH GTAVTTSDGS SFSADAVVLA VPAFRAAEIL AASAPEASLL LRGIRYASVS VLALSIAPTL APSLKGVAGV LVDRREGLMT TAVSLASEKW PHWAGDDALL RVSAGNLHDV RPLDRDDDRL RDDLVAEAEG ILEATLEIRD ARLARWTNAF PHFAPWHLDL VERIDRELRD ALGSTVALAG AWRRGSGIPT CIASGRDAAR ATISRDN
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