Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1597 |
Symbol | |
ID | 8323688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1682698 |
End bp | 1683669 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644952734 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_003110192 |
Protein GI | 256372368 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.338199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTCG TCCCCCGCAA GCGACTCGCC CTGTTCTCGG GACGTTCGCA TCCGCAGCTT GCCCGGGAGG TCGCCGAGCA CCTCGACGTC GAGTTGGGCG CGATCACGCT GCGGGAGTTT TCCGATGGCG AGATCTACTC CCGATTCGAC CAGTCCGTCC GAGGCAAGGA CATCTTCGTC ATCCAAAGCC ACGCTGGGCC TGTCAACGAC GCAATCTTCG AGCAGCTCAT CATGGTGGAC GCTGCGAAGC GTGCCTCGGC GAAGCGCATC ACTGCGGTCT GCCCGTACTA CGGATACTCG CGCCAGGACC GCAAGGCATC GGGTCGCGAG CCGATCACCG CCAAGTTGGT CGCCGACATG CTGCACGCAG CGGGAGCCGA TCGCATCATC GCCGTCGACC TGCATTCGGG TCAGATTCAG GGCTTCTTCG ATGGGCCGGT CGATCATCTC ACGGCCAGTC AGGTGCTGGT GGAGTACCTC CGTGCGTTCG CTCCTCGTGA CGCGGTCATC GTCGCTCCCG ATGCCGGTCG TGTGAAGGTT GCCGAGCGGT TTGCACAGCG CCTCGGCGCT GGACTGGCGT TGGTCCACAA GAGCCGCCCC AAGGGAACGG CCAACGTCGT GACGGCCCTC GAGGTCGTGG GCGACGTGGC GGGTCGTCAC TGCGTGATCG TGGACGATCT GATCGACACA GCGGGCACGG TCACGGCCGC GGCGGAACTG CTTCGCTCGC GCGGAGCTGA TGAGATCTGG GTTATGGCGA CCCACGCCGT GCTCTCGGGC CCCGCGCCCA AGCGGCTCAT GGACGCGCCC ATCTCGCGCG TCGTGGTCAC GAACACCCTG CCGGTTCCAC CCGAACGAGC CATCGCCAAG CTCGAGGTGG TCTCGATCGC GAAGGTCATC GCCGACGCGA TCGCCGCCGT CTTCGAGGAT GGGTCGGTGT CGGAGCTGTT CCAGGGGGAG AACCTCTCCT AG
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Protein sequence | MELVPRKRLA LFSGRSHPQL AREVAEHLDV ELGAITLREF SDGEIYSRFD QSVRGKDIFV IQSHAGPVND AIFEQLIMVD AAKRASAKRI TAVCPYYGYS RQDRKASGRE PITAKLVADM LHAAGADRII AVDLHSGQIQ GFFDGPVDHL TASQVLVEYL RAFAPRDAVI VAPDAGRVKV AERFAQRLGA GLALVHKSRP KGTANVVTAL EVVGDVAGRH CVIVDDLIDT AGTVTAAAEL LRSRGADEIW VMATHAVLSG PAPKRLMDAP ISRVVVTNTL PVPPERAIAK LEVVSIAKVI ADAIAAVFED GSVSELFQGE NLS
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