Gene Afer_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1597 
Symbol 
ID8323688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1682698 
End bp1683669 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID644952734 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_003110192 
Protein GI256372368 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.338199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTCG TCCCCCGCAA GCGACTCGCC CTGTTCTCGG GACGTTCGCA TCCGCAGCTT 
GCCCGGGAGG TCGCCGAGCA CCTCGACGTC GAGTTGGGCG CGATCACGCT GCGGGAGTTT
TCCGATGGCG AGATCTACTC CCGATTCGAC CAGTCCGTCC GAGGCAAGGA CATCTTCGTC
ATCCAAAGCC ACGCTGGGCC TGTCAACGAC GCAATCTTCG AGCAGCTCAT CATGGTGGAC
GCTGCGAAGC GTGCCTCGGC GAAGCGCATC ACTGCGGTCT GCCCGTACTA CGGATACTCG
CGCCAGGACC GCAAGGCATC GGGTCGCGAG CCGATCACCG CCAAGTTGGT CGCCGACATG
CTGCACGCAG CGGGAGCCGA TCGCATCATC GCCGTCGACC TGCATTCGGG TCAGATTCAG
GGCTTCTTCG ATGGGCCGGT CGATCATCTC ACGGCCAGTC AGGTGCTGGT GGAGTACCTC
CGTGCGTTCG CTCCTCGTGA CGCGGTCATC GTCGCTCCCG ATGCCGGTCG TGTGAAGGTT
GCCGAGCGGT TTGCACAGCG CCTCGGCGCT GGACTGGCGT TGGTCCACAA GAGCCGCCCC
AAGGGAACGG CCAACGTCGT GACGGCCCTC GAGGTCGTGG GCGACGTGGC GGGTCGTCAC
TGCGTGATCG TGGACGATCT GATCGACACA GCGGGCACGG TCACGGCCGC GGCGGAACTG
CTTCGCTCGC GCGGAGCTGA TGAGATCTGG GTTATGGCGA CCCACGCCGT GCTCTCGGGC
CCCGCGCCCA AGCGGCTCAT GGACGCGCCC ATCTCGCGCG TCGTGGTCAC GAACACCCTG
CCGGTTCCAC CCGAACGAGC CATCGCCAAG CTCGAGGTGG TCTCGATCGC GAAGGTCATC
GCCGACGCGA TCGCCGCCGT CTTCGAGGAT GGGTCGGTGT CGGAGCTGTT CCAGGGGGAG
AACCTCTCCT AG
 
Protein sequence
MELVPRKRLA LFSGRSHPQL AREVAEHLDV ELGAITLREF SDGEIYSRFD QSVRGKDIFV 
IQSHAGPVND AIFEQLIMVD AAKRASAKRI TAVCPYYGYS RQDRKASGRE PITAKLVADM
LHAAGADRII AVDLHSGQIQ GFFDGPVDHL TASQVLVEYL RAFAPRDAVI VAPDAGRVKV
AERFAQRLGA GLALVHKSRP KGTANVVTAL EVVGDVAGRH CVIVDDLIDT AGTVTAAAEL
LRSRGADEIW VMATHAVLSG PAPKRLMDAP ISRVVVTNTL PVPPERAIAK LEVVSIAKVI
ADAIAAVFED GSVSELFQGE NLS