Gene Afer_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1537 
Symbol 
ID8323623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1609985 
End bp1610911 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID644952670 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_003110133 
Protein GI256372309 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCG CTGAGGGCAA GGTCATCTGG ATGGACGGCG AGGTGGTCCC GTGGGGCGAG 
GCGAAGGTTC ACGTGCTCAC CCACGCGCTC CACTACGGCT ACGGCGTCTT CGAGGGCATC 
CGTGCCTACG ATACGCCACG CGGCTCCGCC GTGTTCCGAC TGCGAGAGCA CCTCGTCCGG 
CTGCATCGCT CGGCGCGCAT GCTGCTGATG GAGATCCCCT TCAGCGTCGA CGAGCTCATC 
GAGGCGACGA GGACGGTCGT CGCGGCCAAC GGAGAACCGG CGTGCTACAT CCGGCCCGTC 
GCCTTCACCG CCTACGGCGA GATGGGCCTG TCGCCCCTGT CCTCGTCGAT TTCGGTGTCG 
ATCGCGACGT GGCCGTGGGG GGCCTACCTG GGCGACGAGG GGATCGCCAA GGGGGTGCGT 
GCGAAGGTGT CGTCGTGGCG CCGACACGAC CCGAACGTGA TCCCTCCGGC CGCCAAGGTG 
ACCGGAGGCT ACGTCAACTC GGCGCTCGCC AAGGCCGAGG CGATCAAGGC CGGCTACGAC 
GAAGCCATTC TCCTCTCCCC GCAAGGCTAC GTCTCCGAGT GCACAGGGGA GAACCTGTTC 
GCGGTGTTCG ACGGCGCGAT CGTGACGCCA CCGATCGCGG CGGGGGCGCT CGCGGGCATC 
ACGCGACAGA CCATCATGAC GCTGGCGGCC GACGCCGGGA TCCCGGTGCG CGAGGCCAAC 
TTGCTCCGGT CCGATCTCTA CATCGCCGAC GAGGTCTTCT TGTCGGGCAC CGCCGCCGAA 
GTCGTACCGA TCGCCTCCGT CGACGATCGG CCCGTCGGTA CCGGAGAACC CGGTCCACTC 
GCCCGAGAGC TGCAACGGCG CTACTACGCG GCGGTGCACG GCGAAGATCC GCAGCACGAG 
TCCTGGCTCA CCTATGTCCA CGGCTGA
 
Protein sequence
MAIAEGKVIW MDGEVVPWGE AKVHVLTHAL HYGYGVFEGI RAYDTPRGSA VFRLREHLVR 
LHRSARMLLM EIPFSVDELI EATRTVVAAN GEPACYIRPV AFTAYGEMGL SPLSSSISVS 
IATWPWGAYL GDEGIAKGVR AKVSSWRRHD PNVIPPAAKV TGGYVNSALA KAEAIKAGYD 
EAILLSPQGY VSECTGENLF AVFDGAIVTP PIAAGALAGI TRQTIMTLAA DAGIPVREAN 
LLRSDLYIAD EVFLSGTAAE VVPIASVDDR PVGTGEPGPL ARELQRRYYA AVHGEDPQHE 
SWLTYVHG