Gene Afer_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1461 
Symbol 
ID8323544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1530654 
End bp1531304 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID644952592 
Productendonuclease III 
Protein accessionYP_003110057 
Protein GI256372233 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGACG AAACCCGACG GGCTCTCGCG GTCGACGAAC GACTCGAAGA GCTCTATCCA 
GGGACGGCGG TGTCGCTGTG TGCCCTGCGC TTCGAGACCC CGTTTCAGCT CCTCGTGGCG 
ACGGTCTTGT CGGCGCAGAC CACCGACGCT GCGGTGAACC TCGTGACGCC AGGACTGTTC 
GCTCGCTACC CGGACGCCGA GACTCTCGCC CGAGCTCCGA TCGAGCAGGT GGAGGCGCTG 
GTGCGTCCGA CCGGTTTCTA TCGAACGAAG GCTCGTCACA TCGTCGCGCT GGCAGCTGCG 
ATCGTCGAGC GCTTCGGAGG AGAGGTTCCC CAAGGACTCG AGGAGCTGAC CAGCTTGCCC 
GGGGTTGGAC GCAAGACGGC CAATGTCGTT CGTTCGGTCG GCTTCTCGTT GCCAGGGCTC 
CCCGTCGACA CGCACGTCAA ACGGGTGAGT CGTCGCCTCG GGATCGCCCG ATCGTCGACC 
CCGGAGGGGA TCGAACAGGA GCTCTGTGCG GTCTTGGCAC CGAAGCGCTG GGGGACCTTC 
TCGTTGCGCA TGATCCTGCA CGGTCGGGAG ACGTGCACGG CGAGGCGGCC ACTGTGCGCC 
GGCTGCCGGC TCGCGGACCT GTGCGAGGCG CATCGCGCCG GATTGTGCTA A
 
Protein sequence
MQDETRRALA VDERLEELYP GTAVSLCALR FETPFQLLVA TVLSAQTTDA AVNLVTPGLF 
ARYPDAETLA RAPIEQVEAL VRPTGFYRTK ARHIVALAAA IVERFGGEVP QGLEELTSLP 
GVGRKTANVV RSVGFSLPGL PVDTHVKRVS RRLGIARSST PEGIEQELCA VLAPKRWGTF 
SLRMILHGRE TCTARRPLCA GCRLADLCEA HRAGLC