Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1461 |
Symbol | |
ID | 8323544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1530654 |
End bp | 1531304 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952592 |
Product | endonuclease III |
Protein accession | YP_003110057 |
Protein GI | 256372233 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGACG AAACCCGACG GGCTCTCGCG GTCGACGAAC GACTCGAAGA GCTCTATCCA GGGACGGCGG TGTCGCTGTG TGCCCTGCGC TTCGAGACCC CGTTTCAGCT CCTCGTGGCG ACGGTCTTGT CGGCGCAGAC CACCGACGCT GCGGTGAACC TCGTGACGCC AGGACTGTTC GCTCGCTACC CGGACGCCGA GACTCTCGCC CGAGCTCCGA TCGAGCAGGT GGAGGCGCTG GTGCGTCCGA CCGGTTTCTA TCGAACGAAG GCTCGTCACA TCGTCGCGCT GGCAGCTGCG ATCGTCGAGC GCTTCGGAGG AGAGGTTCCC CAAGGACTCG AGGAGCTGAC CAGCTTGCCC GGGGTTGGAC GCAAGACGGC CAATGTCGTT CGTTCGGTCG GCTTCTCGTT GCCAGGGCTC CCCGTCGACA CGCACGTCAA ACGGGTGAGT CGTCGCCTCG GGATCGCCCG ATCGTCGACC CCGGAGGGGA TCGAACAGGA GCTCTGTGCG GTCTTGGCAC CGAAGCGCTG GGGGACCTTC TCGTTGCGCA TGATCCTGCA CGGTCGGGAG ACGTGCACGG CGAGGCGGCC ACTGTGCGCC GGCTGCCGGC TCGCGGACCT GTGCGAGGCG CATCGCGCCG GATTGTGCTA A
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Protein sequence | MQDETRRALA VDERLEELYP GTAVSLCALR FETPFQLLVA TVLSAQTTDA AVNLVTPGLF ARYPDAETLA RAPIEQVEAL VRPTGFYRTK ARHIVALAAA IVERFGGEVP QGLEELTSLP GVGRKTANVV RSVGFSLPGL PVDTHVKRVS RRLGIARSST PEGIEQELCA VLAPKRWGTF SLRMILHGRE TCTARRPLCA GCRLADLCEA HRAGLC
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