| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1450 |
|---|
| Symbol | |
|---|
| ID | 8323533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1517617 |
|---|
| End bp | 1519905 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644952581 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003110046 |
|---|
| Protein GI | 256372222 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG TTGTCGTTGA GGTGCTCACC GACCGGTGTG CCGGGTGTCA AGAGTGTCTG
ATTCGTTGTC CGGTGGAGGC GATCGATCTC GACCTCGATC GTTACGTCGT CACTGTCGAC
AGCGCACGGT GTGTCGGGTG CCGCCAGTGC GAGCGGGTCT GTCCGTTCGA TGCGATCGTC
GTCGCGGGTG ATCCGCAGGT TGCGCCGGGC GCTGTCTTGC CAGAGTTGGA TCCAGACGTG
GCCCTGGGCG GCCTTGACGA GGTACGCGGC GGATTCGCGA GCTTTGCGGA CGTGCTCGAA
GAGGCCAATC GCTGCTTGGC GTGTCCGGAC CCGACGTGTG TGCGAGGCTG CCCGACGCAC
AACGACATCC CCGAGTTCAT CGCTCAGCTG CGTAGTGGCG ATCTCGCCGG TGCCCGTGAC
GTGCTGAGCG CACATACATC GTTGCCCGAG ATCTGCTCAC GCGTCTGTGA TGCGGCGATC
CAATGCGAGG GGAGCTGTTC CTGGCGGCTT GCCGGAGCGA GGCCGGTGGC GATCCACGCC
ATCGAGCGCT ACATCGCTGA CCATGCTGAT GCGGTCGACC CGACGCCGGC TGCCAAGGAG
GGCCGCGTAC TGATCGTTGG GAGCGGTCCG GCCGGGCTCG GTGCCGCAGA TGTCCTGTCG
GGAGCCGGGG TCGAGGTCAC CGTGGTCGAC GCTGCCGACC AACCTGGAGG CTTGCTGCGC
AACGGGATCC CGCGGTTCAC GCTGCCCTCG GACGTTCTCG ATCGGGTCAT CGAGCGTCTC
GAGCGGCGAG GCGTGGCTTT CCAGATGAAC ACCGCGCTGT CTCCGGACGA TGTGGTGGCG
GCGCGTAACC GCTACGACGC CGTGGTGCTG GCCGTTGGTG CTGGCGCTCC GTTGCCCGTA
CGCGCCGATG GCATCGAGAC CATCTCTGTC GGCAACGCAC TCGACGAGAT CGCCGTGGCC
GAGGCGGCGA TTCAAGCTGG TTTGCCGCCG GTGGATGATC GTGTGCTCGT GGTTGGGGCG
GGCAACACGG CGATGGACGT CGCGCGCCTG GTGCGACGGC GCGGTGGCTC TGCAGTCTGT
ATCGATTGGA TGGATCAGCG CTTCAGCCTT GTGCGGCCTG ACGAACTTGC CGAAGCGGAG
GCCGAGGGCG TACAGGTGCG ATTTGGCGTG ACGCTCCAGT CGGTCGCCGA ACGCGACGAC
GGGATCCACT GTCTCCTCGT TCGGACGAAG CAGGAGCGCG CGAGTGAGCG GCCTACGGTG
ACCAGTGAGA TCGCCGAGGA GCTCGTGGTC GATCGAGTGG TAGCTGCGAT GGGCTATCGC
GTCGATCCGT CCTGGATCGC TTCGGTGCCT GGGCTCGCTG AACGCAAGGA AGTTGGAGAT
CTGCCGAGCC GACACTGGTT GGCCTCAGGG ATCTTCGCGG GTGAGCCGCT CCGAGGGTTG
CGTGTCGGTG ATCTCGCCTG GAGCCGGGAT CGGGCCCGGA GGCGAGCGGC AGCGTGGCGG
CAGGCCCGCA CCTGGGCCAT TGGTGATGTC CTCGTCGGAC CGTCAACGGT GGTGGAGGCG
ATGGCTCACG GGCGCCGGGT CGGGGAGGAG ATGCTCGCCG CAGGCGGTCG CAACGCGGTG
TTGCCCGGTC GACGACTGGC TCCGCCACGG GTGCTCATTG CCTACGACTC CAAGGGTGGC
CACACCCGCG CGGCGGCACT TTCCCTGGGA GAGACGCTCG CGAATTTTGC GCCAAGCGTG
CGCTGCATCC CCGCCGATCA GTTCGAAACC GAGGACCTCG TCGACGCCGA TCTGATCGTT
GTCGCCGGCT GGGTTGACGG GGCGCTGGTG GTCGGGCAAC GGCCCAGCGA GGGTATGCGT
CGTTTGCTCG AGGCACTACC GGCCAATCTG AGGGCGCCAG TTGGCCTTCT CCTGACGTAT
GCGGTGGACC CGGGAGATGC GCTCAAGATC GCGGCAGAGC TGGCCCGCGG GCGGGGCGCG
ACGGTTGCGG CCACCCTCGC ATTGGGACCA CAAGGTTCGC CGGGCGACGA GCGTCGATTC
ATCGCTGATC TCGGTGATGC TGCCTGGGCC GACTCCTCGT CCATGACTGC GCTCGTCAGC
GCGGTGTTGG AAGGTTCGGA TCCGCGCTGG TTGGTTGGCC CGCGCCCGCG CGTTGCCGAG
GCGCTTGCAC ATGCCCTCGT CGAGCGCCAC GGGCGCGGCG TCCTCTCTCA CGAAGCTCAG
GCGGCCGAGC GTCTGCGAGA ACTTGCAAGC AGTCTTCGCC TTCTTCGGGA GGCACCCATC
CCCTCCTAG
|
|---|
| Protein sequence | MSAVVVEVLT DRCAGCQECL IRCPVEAIDL DLDRYVVTVD SARCVGCRQC ERVCPFDAIV
VAGDPQVAPG AVLPELDPDV ALGGLDEVRG GFASFADVLE EANRCLACPD PTCVRGCPTH
NDIPEFIAQL RSGDLAGARD VLSAHTSLPE ICSRVCDAAI QCEGSCSWRL AGARPVAIHA
IERYIADHAD AVDPTPAAKE GRVLIVGSGP AGLGAADVLS GAGVEVTVVD AADQPGGLLR
NGIPRFTLPS DVLDRVIERL ERRGVAFQMN TALSPDDVVA ARNRYDAVVL AVGAGAPLPV
RADGIETISV GNALDEIAVA EAAIQAGLPP VDDRVLVVGA GNTAMDVARL VRRRGGSAVC
IDWMDQRFSL VRPDELAEAE AEGVQVRFGV TLQSVAERDD GIHCLLVRTK QERASERPTV
TSEIAEELVV DRVVAAMGYR VDPSWIASVP GLAERKEVGD LPSRHWLASG IFAGEPLRGL
RVGDLAWSRD RARRRAAAWR QARTWAIGDV LVGPSTVVEA MAHGRRVGEE MLAAGGRNAV
LPGRRLAPPR VLIAYDSKGG HTRAAALSLG ETLANFAPSV RCIPADQFET EDLVDADLIV
VAGWVDGALV VGQRPSEGMR RLLEALPANL RAPVGLLLTY AVDPGDALKI AAELARGRGA
TVAATLALGP QGSPGDERRF IADLGDAAWA DSSSMTALVS AVLEGSDPRW LVGPRPRVAE
ALAHALVERH GRGVLSHEAQ AAERLRELAS SLRLLREAPI PS
|
|---|
| |