Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1437 |
Symbol | |
ID | 8323520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1504235 |
End bp | 1505797 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644952569 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003110034 |
Protein GI | 256372210 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGACAC AAGAGAAGCG CACGATTCGC GCGAACCCCT GGTGGGCCCT GGCCAGCGTG GCCTTCGGGG TGATCATGGT CGGTCTCGAC GCGACCGTCG TGGCGATCGC GAATCCCTTC ATCGCGAGAG ACCTGCACGC CAACCTCGCT GATCTGCAGT GGGTTACGAA CGCGTACCTG CTCACCACTG CGGTGCTGCT GATCCCGGCT GGCAAGCTCG CCGATCGGAT CGGTCGACGG GCCACCTTCT TGGTGGGCAT GCTGGGCTTC GCCGCCGCGT CAGCAGGTGT GGGGCTCGCG GGGTCCATTG GGTGGGTCAT CGCCTTCCGC GCCATCCAAG GCGGTTTCGG TGCGCTGATC ATGCCGAGCA CGCTTGCGAT CTTGCGTGCG AGTTTCCCGG TCGAGCGGCT GAACACGGCC ATCGGTATCT GGGGCGCTTC CAGTGGCTTG GCGATCGCTG GCGGACCGAT CGTGGCTGGG CTGTTGGTGC AGAACGTCTC GTGGCAGTCG GTGTTCTACC TCAATGTGCC CGTCGGAGCC ATTGGCATCC TCCTCGGCCT GTTCGTCCTC GCCGAATCAC GTGAACAAGA ACCCGACCGA CTCGACGCTC CGGGGACCAT CGTGCTTGCC GGTACGTTGT TCTCCCTCGT CTTCGGGCTG ATCAAGGCCC AGAGCTGGGG ATGGCTCGCG GGTCGCACCT GGATCTTCTT CGGGTTGGCA ATCGTTGGCG CGGTGATCTT CGTGTTCGTT GAAGGGCGAG CTCGCTTCCC ATTGGTGCCA CTTGGCATGT TCGGACGCCG ACAGGTCTCG CTGTCCGCTG TGGTGGTCAT CTTGTCGTTC TTCGCCTTCT TCGGGGTGGT GTTCTTCGTC GCCCTCTATC TCCAAGAGGT ACACGGCTAC AGCCCCGTAG CGGCCGGCGT GCGAGTTTTG CCCTTGACCG CTTCCTTTGT GGTCGGGGCG CCGCTCGGTG CTGCGCTGAA CGGTCGGTTC GGGCCGCGCG TGCCGGTCGG GATCGGTATG GCTGCCATCG CCGTTGGGCT CGCACTGCTC ACGACGCTCG GGGTCAGCTC CTCCTATCTC GTCCACCTTG CACTTCCGTT CGTCATCGTC GGATTGGGTA TTGGCCTCGT CATGCCGACG ACCTCGGATA CCATCGTCGC GAACGTGCCT GAGGCCGAAG CGGGCGTGGC CGGAGGTGTG CAGTCGACCG CCGTGCAGAT CGGTGGGCTC CTTGGAACGG CGGTGCTCGG TTCGGTGCTC TCGAATCGGG TGGGCAGTGT ACTGATCTCC AAGCTCGAGG CAGCGGGTGT GCCTGGCGTC GTCGCAACGC GACTCGGACC AGCGCGCCCC TTGATTGCGG AAGGACTCGC ACCGCGGATT CCACAAGTAC CGGCCCTTGT TCAGACCGCC GTCACCAACG GGTCGCACGC TGCGTTCATG AGCGGTCTGC ATGTGGCCAT GATCGTCGCG ATCGGCGTGG CGATCGTCGG CGCGATCGTG GGGCTCGCGC TCGGGGCCGT CCGCGTGGGC AGTGGTCACC GGGCCTCGGC GCCACTGGCG TGA
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Protein sequence | METQEKRTIR ANPWWALASV AFGVIMVGLD ATVVAIANPF IARDLHANLA DLQWVTNAYL LTTAVLLIPA GKLADRIGRR ATFLVGMLGF AAASAGVGLA GSIGWVIAFR AIQGGFGALI MPSTLAILRA SFPVERLNTA IGIWGASSGL AIAGGPIVAG LLVQNVSWQS VFYLNVPVGA IGILLGLFVL AESREQEPDR LDAPGTIVLA GTLFSLVFGL IKAQSWGWLA GRTWIFFGLA IVGAVIFVFV EGRARFPLVP LGMFGRRQVS LSAVVVILSF FAFFGVVFFV ALYLQEVHGY SPVAAGVRVL PLTASFVVGA PLGAALNGRF GPRVPVGIGM AAIAVGLALL TTLGVSSSYL VHLALPFVIV GLGIGLVMPT TSDTIVANVP EAEAGVAGGV QSTAVQIGGL LGTAVLGSVL SNRVGSVLIS KLEAAGVPGV VATRLGPARP LIAEGLAPRI PQVPALVQTA VTNGSHAAFM SGLHVAMIVA IGVAIVGAIV GLALGAVRVG SGHRASAPLA
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