| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1405 |
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| Symbol | |
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| ID | 8323487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1467021 |
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| End bp | 1468199 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952536 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_003110002 |
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| Protein GI | 256372178 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00776945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCC GCGTGCTGAT CGTCGGTGGA GGCGACGGGG GCACGATCCT CGCAAACTCG
CTCGATCCCC GCCGCTTCGA CGTGACCGTG CTGACCGCCT CACTTGAACA TGTCTTCCAG
CGCGGTTACC TCGGCGTCGC CTTCCAGGGG CGGCGTCGCA ACCTCGTGCG CGACGAGCAC
AGCTTGCTGC GCTCGCACAT CACACTGATC CACGACACCG CAGTGCGCAT CGACCTGGTT
GACCACGAGG TCGAGACCGC GACCGGCAGG CGTCTCGGTT ACGACGACCT CGTCATCGCG
ACCGGTGTGC GCACCGATCC GTCCCAGATC CCCGGTCTCT GGGAGATCAA TGAGCGCATC
GGCGACTTCC ACTCGACGAC CGCGAATGCG CGTCGCTTGT GGCGCAACCT CAACGCCTTC
TCCGGAGGCA CCGTGGCACT CGGACAAGCG AGCCCGATCA TCAAGTGTCC ACCCTCGCCC
GTGGAGGGAA TCCTCGGCGT CGACGCACGA CTACGGGCTC GGAGGGTACG GGAGGCGGCG
AAGCTCGTGC TGTTCACCCC GTACCCACGC GCGTACCCCG CAGAGCCCAT CAACGAGGTG
ATCACGCCGA TTCTCGAGGA GCGAGGTATC GAGGTCATGC CGTTCTTCGA CGTGGATCGG
ATCGATCCCG CGACCGGGAC CATCACTTCG CTCGAGGGCG ACGAAGTCAA GGCAGACCTG
CCCATCGTCG TACCCCCGTT CGTTGGAGCG CCGATCGTCT ACGAGCCCGC GGACGTCGTC
GACGACAATG GACTCGTGAA GACGAACAAG GAGACGCTCG CCGTCGAGGG GGTCGAGCAT
GCGTGGTGCA TCGGTGATGC CAACAACGTG CCGACGTCCA AGGCGGGCGT GGGCGCGCAC
CTCGAGGCGA AGGTGGTCGC GCGGACACTG GCAGGTCACC CGACGCGCTT CGATGGGCGC
ACCAACTGCT CCCTCGAGAT CGTAGGAGAT CGGCGCTTGA CCTTCGTCAT TGGATCTTTC
GACGCTCCGG TCGAGAAGCT CCGGCCGACA CGAGTCAAGT ACCTCGAGGA GTGGTTGCTC
GGCGAGACGT TCTTCTGGGG CCTTCGGGGC TGGCTGGACC CGGTCTTCGA CGCCTACTTC
CGACTGACCG AGCCAAAACC TCGGCGAGTC GCCGCCTGA
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| Protein sequence | MTRRVLIVGG GDGGTILANS LDPRRFDVTV LTASLEHVFQ RGYLGVAFQG RRRNLVRDEH
SLLRSHITLI HDTAVRIDLV DHEVETATGR RLGYDDLVIA TGVRTDPSQI PGLWEINERI
GDFHSTTANA RRLWRNLNAF SGGTVALGQA SPIIKCPPSP VEGILGVDAR LRARRVREAA
KLVLFTPYPR AYPAEPINEV ITPILEERGI EVMPFFDVDR IDPATGTITS LEGDEVKADL
PIVVPPFVGA PIVYEPADVV DDNGLVKTNK ETLAVEGVEH AWCIGDANNV PTSKAGVGAH
LEAKVVARTL AGHPTRFDGR TNCSLEIVGD RRLTFVIGSF DAPVEKLRPT RVKYLEEWLL
GETFFWGLRG WLDPVFDAYF RLTEPKPRRV AA
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